Gene : Potri.003G058700 P. trichocarpa v3.1
Defline:  (1 of 79) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  623
Name:  ? Potri.003G058700 Secondary Identifier:  ? PAC:37238429
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0 Pathways

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G058700 0.5kb upstream 0.5kb upstream 3491 true Chr03: 8646244-8649734 Populus trichocarpa
Potri.003G058700 0.5kb upstream 0.5kb upstream 500 false Chr03: 8649235-8649734 Populus trichocarpa
Potri.003G058700 0.5kb downstream 0.5kb downstream 3491 true Chr03: 8645744-8649234 Populus trichocarpa
Potri.003G058700 0.5kb downstream 0.5kb downstream 500 false Chr03: 8645744-8646243 Populus trichocarpa
Potri.003G058700 1.0kb upstream 1.0kb upstream 3991 true Chr03: 8646244-8650234 Populus trichocarpa
Potri.003G058700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 8649235-8650234 Populus trichocarpa
Potri.003G058700 1.0kb downstream 1.0kb downstream 3991 true Chr03: 8645244-8649234 Populus trichocarpa
Potri.003G058700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 8645244-8646243 Populus trichocarpa
Potri.003G058700 2.0kb upstream 2.0kb upstream 4991 true Chr03: 8646244-8651234 Populus trichocarpa
Potri.003G058700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 8649235-8651234 Populus trichocarpa
Potri.003G058700 2.0kb downstream 2.0kb downstream 4991 true Chr03: 8644244-8649234 Populus trichocarpa
Potri.003G058700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 8644244-8646243 Populus trichocarpa
Potri.003G058700 5.0kb upstream 5.0kb upstream 7991 true Chr03: 8646244-8654234 Populus trichocarpa
Potri.003G058700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 8649235-8654234 Populus trichocarpa
Potri.003G058700 5.0kb downstream 5.0kb downstream 7991 true Chr03: 8641244-8649234 Populus trichocarpa
Potri.003G058700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 8641244-8646243 Populus trichocarpa
Potri.003G058700 10.0kb upstream 10.0kb upstream 12991 true Chr03: 8646244-8659234 Populus trichocarpa
Potri.003G058700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 8649235-8659234 Populus trichocarpa
Potri.003G058700 10.0kb downstream 10.0kb downstream 12991 true Chr03: 8636244-8649234 Populus trichocarpa
Potri.003G058700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 8636244-8646243 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458046 5262 Malpighiales View MSA
124245140 5268 Malvidae View MSA
124060776 5270 Rosid View MSA
123741024 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain