Gene : Potri.003G058300 P. trichocarpa v3.1
Defline:  (1 of 6) PF01535//PF14432 - PPR repeat (PPR) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  618
Name:  ? Potri.003G058300 Secondary Identifier:  ? PAC:37236775
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G058300 0.5kb upstream 0.5kb upstream 3254 true Chr03: 8622488-8625741 Populus trichocarpa
Potri.003G058300 0.5kb upstream 0.5kb upstream 500 false Chr03: 8625242-8625741 Populus trichocarpa
Potri.003G058300 0.5kb downstream 0.5kb downstream 3254 true Chr03: 8621988-8625241 Populus trichocarpa
Potri.003G058300 0.5kb downstream 0.5kb downstream 500 false Chr03: 8621988-8622487 Populus trichocarpa
Potri.003G058300 1.0kb upstream 1.0kb upstream 3754 true Chr03: 8622488-8626241 Populus trichocarpa
Potri.003G058300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 8625242-8626241 Populus trichocarpa
Potri.003G058300 1.0kb downstream 1.0kb downstream 3754 true Chr03: 8621488-8625241 Populus trichocarpa
Potri.003G058300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 8621488-8622487 Populus trichocarpa
Potri.003G058300 2.0kb upstream 2.0kb upstream 4754 true Chr03: 8622488-8627241 Populus trichocarpa
Potri.003G058300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 8625242-8627241 Populus trichocarpa
Potri.003G058300 2.0kb downstream 2.0kb downstream 4754 true Chr03: 8620488-8625241 Populus trichocarpa
Potri.003G058300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 8620488-8622487 Populus trichocarpa
Potri.003G058300 5.0kb upstream 5.0kb upstream 7754 true Chr03: 8622488-8630241 Populus trichocarpa
Potri.003G058300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 8625242-8630241 Populus trichocarpa
Potri.003G058300 5.0kb downstream 5.0kb downstream 7754 true Chr03: 8617488-8625241 Populus trichocarpa
Potri.003G058300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 8617488-8622487 Populus trichocarpa
Potri.003G058300 10.0kb upstream 10.0kb upstream 12754 true Chr03: 8622488-8635241 Populus trichocarpa
Potri.003G058300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 8625242-8635241 Populus trichocarpa
Potri.003G058300 10.0kb downstream 10.0kb downstream 12754 true Chr03: 8612488-8625241 Populus trichocarpa
Potri.003G058300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 8612488-8622487 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454340 5262 Malpighiales View MSA
124240083 5268 Malvidae View MSA
124068525 5270 Rosid View MSA
123750280 5271 Pentapetalae View MSA
122796437 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain