Gene : Potri.003G054900 P. trichocarpa v3.1
Defline:  (1 of 4) K07889 - Ras-related protein Rab-5C (RAB5C) Genomic Order:  580
Name:  ? Potri.003G054900 Secondary Identifier:  ? PAC:37236819
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G054900 0.5kb upstream 0.5kb upstream 3977 true Chr03: 8151423-8155399 Populus trichocarpa
Potri.003G054900 0.5kb upstream 0.5kb upstream 500 false Chr03: 8154900-8155399 Populus trichocarpa
Potri.003G054900 0.5kb downstream 0.5kb downstream 3977 true Chr03: 8150923-8154899 Populus trichocarpa
Potri.003G054900 0.5kb downstream 0.5kb downstream 500 false Chr03: 8150923-8151422 Populus trichocarpa
Potri.003G054900 1.0kb upstream 1.0kb upstream 4477 true Chr03: 8151423-8155899 Populus trichocarpa
Potri.003G054900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 8154900-8155899 Populus trichocarpa
Potri.003G054900 1.0kb downstream 1.0kb downstream 4477 true Chr03: 8150423-8154899 Populus trichocarpa
Potri.003G054900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 8150423-8151422 Populus trichocarpa
Potri.003G054900 2.0kb upstream 2.0kb upstream 5477 true Chr03: 8151423-8156899 Populus trichocarpa
Potri.003G054900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 8154900-8156899 Populus trichocarpa
Potri.003G054900 2.0kb downstream 2.0kb downstream 5477 true Chr03: 8149423-8154899 Populus trichocarpa
Potri.003G054900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 8149423-8151422 Populus trichocarpa
Potri.003G054900 5.0kb upstream 5.0kb upstream 8477 true Chr03: 8151423-8159899 Populus trichocarpa
Potri.003G054900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 8154900-8159899 Populus trichocarpa
Potri.003G054900 5.0kb downstream 5.0kb downstream 8477 true Chr03: 8146423-8154899 Populus trichocarpa
Potri.003G054900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 8146423-8151422 Populus trichocarpa
Potri.003G054900 10.0kb upstream 10.0kb upstream 13477 true Chr03: 8151423-8164899 Populus trichocarpa
Potri.003G054900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 8154900-8164899 Populus trichocarpa
Potri.003G054900 10.0kb downstream 10.0kb downstream 13477 true Chr03: 8141423-8154899 Populus trichocarpa
Potri.003G054900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 8141423-8151422 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122463449 5262 Malpighiales View MSA
124246343 5268 Malvidae View MSA
124070426 5270 Rosid View MSA
123753240 5271 Pentapetalae View MSA
122795840 5272 Eudicot View MSA
122049622 5273 Angiosperm View MSA
121344376 5274 Embryophyte View MSA
123424016 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain