Gene : Potri.003G045300 P. trichocarpa v3.1
Defline:  (1 of 2) K12197 - charged multivesicular body protein 1 (CHMP1, VPS46, DID2) Genomic Order:  482
Name:  ? Potri.003G045300 Secondary Identifier:  ? PAC:37237105
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G045300 0.5kb upstream 0.5kb upstream 1843 true Chr03: 6069342-6071184 Populus trichocarpa
Potri.003G045300 0.5kb upstream 0.5kb upstream 500 false Chr03: 6069342-6069841 Populus trichocarpa
Potri.003G045300 0.5kb downstream 0.5kb downstream 1843 true Chr03: 6069842-6071684 Populus trichocarpa
Potri.003G045300 0.5kb downstream 0.5kb downstream 500 false Chr03: 6071185-6071684 Populus trichocarpa
Potri.003G045300 1.0kb upstream 1.0kb upstream 2343 true Chr03: 6068842-6071184 Populus trichocarpa
Potri.003G045300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 6068842-6069841 Populus trichocarpa
Potri.003G045300 1.0kb downstream 1.0kb downstream 2343 true Chr03: 6069842-6072184 Populus trichocarpa
Potri.003G045300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 6071185-6072184 Populus trichocarpa
Potri.003G045300 2.0kb upstream 2.0kb upstream 3343 true Chr03: 6067842-6071184 Populus trichocarpa
Potri.003G045300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 6067842-6069841 Populus trichocarpa
Potri.003G045300 2.0kb downstream 2.0kb downstream 3343 true Chr03: 6069842-6073184 Populus trichocarpa
Potri.003G045300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 6071185-6073184 Populus trichocarpa
Potri.003G045300 5.0kb upstream 5.0kb upstream 6343 true Chr03: 6064842-6071184 Populus trichocarpa
Potri.003G045300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 6064842-6069841 Populus trichocarpa
Potri.003G045300 5.0kb downstream 5.0kb downstream 6343 true Chr03: 6069842-6076184 Populus trichocarpa
Potri.003G045300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 6071185-6076184 Populus trichocarpa
Potri.003G045300 10.0kb upstream 10.0kb upstream 11343 true Chr03: 6059842-6071184 Populus trichocarpa
Potri.003G045300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 6059842-6069841 Populus trichocarpa
Potri.003G045300 10.0kb downstream 10.0kb downstream 11343 true Chr03: 6069842-6081184 Populus trichocarpa
Potri.003G045300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 6071185-6081184 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453098 5262 Malpighiales View MSA
124253428 5268 Malvidae View MSA
124063895 5270 Rosid View MSA
123748216 5271 Pentapetalae View MSA
122794716 5272 Eudicot View MSA
122044262 5273 Angiosperm View MSA
121349635 5274 Embryophyte View MSA
123427092 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain