Gene : Potri.003G019800 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR11157:SF13 - PROTEIN ELO-8, ISOFORM A Genomic Order:  211
Name:  ? Potri.003G019800 Secondary Identifier:  ? PAC:37237642

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5080 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6433 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6598 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7036 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7601 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7619 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G019800 0.5kb upstream 0.5kb upstream 1687 true Chr03: 2373903-2375589 Populus trichocarpa
Potri.003G019800 0.5kb upstream 0.5kb upstream 500 false Chr03: 2373903-2374402 Populus trichocarpa
Potri.003G019800 0.5kb downstream 0.5kb downstream 1687 true Chr03: 2374403-2376089 Populus trichocarpa
Potri.003G019800 0.5kb downstream 0.5kb downstream 500 false Chr03: 2375590-2376089 Populus trichocarpa
Potri.003G019800 1.0kb upstream 1.0kb upstream 2187 true Chr03: 2373403-2375589 Populus trichocarpa
Potri.003G019800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2373403-2374402 Populus trichocarpa
Potri.003G019800 1.0kb downstream 1.0kb downstream 2187 true Chr03: 2374403-2376589 Populus trichocarpa
Potri.003G019800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 2375590-2376589 Populus trichocarpa
Potri.003G019800 2.0kb upstream 2.0kb upstream 3187 true Chr03: 2372403-2375589 Populus trichocarpa
Potri.003G019800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2372403-2374402 Populus trichocarpa
Potri.003G019800 2.0kb downstream 2.0kb downstream 3187 true Chr03: 2374403-2377589 Populus trichocarpa
Potri.003G019800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 2375590-2377589 Populus trichocarpa
Potri.003G019800 5.0kb upstream 5.0kb upstream 6187 true Chr03: 2369403-2375589 Populus trichocarpa
Potri.003G019800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2369403-2374402 Populus trichocarpa
Potri.003G019800 5.0kb downstream 5.0kb downstream 6187 true Chr03: 2374403-2380589 Populus trichocarpa
Potri.003G019800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 2375590-2380589 Populus trichocarpa
Potri.003G019800 10.0kb upstream 10.0kb upstream 11187 true Chr03: 2364403-2375589 Populus trichocarpa
Potri.003G019800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2364403-2374402 Populus trichocarpa
Potri.003G019800 10.0kb downstream 10.0kb downstream 11187 true Chr03: 2374403-2385589 Populus trichocarpa
Potri.003G019800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 2375590-2385589 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458490 5262 Malpighiales View MSA
124248997 5268 Malvidae View MSA
124069111 5270 Rosid View MSA
123751045 5271 Pentapetalae View MSA
122796909 5272 Eudicot View MSA
122047091 5273 Angiosperm View MSA
121347411 5274 Embryophyte View MSA
123427662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain