Gene : Potri.003G022900 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR30620//PTHR30620:SF40 - PERIPLASMIC BETA-GLUCOSIDASE-RELATED // BETA-D-XYLOSIDASE 3-RELATED Genomic Order:  244
Name:  ? Potri.003G022900 Secondary Identifier:  ? PAC:37237929

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G022900 0.5kb upstream 0.5kb upstream 5401 true Chr03: 2730607-2736007 Populus trichocarpa
Potri.003G022900 0.5kb upstream 0.5kb upstream 500 false Chr03: 2730607-2731106 Populus trichocarpa
Potri.003G022900 0.5kb downstream 0.5kb downstream 5401 true Chr03: 2731107-2736507 Populus trichocarpa
Potri.003G022900 0.5kb downstream 0.5kb downstream 500 false Chr03: 2736008-2736507 Populus trichocarpa
Potri.003G022900 1.0kb upstream 1.0kb upstream 5901 true Chr03: 2730107-2736007 Populus trichocarpa
Potri.003G022900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 2730107-2731106 Populus trichocarpa
Potri.003G022900 1.0kb downstream 1.0kb downstream 5901 true Chr03: 2731107-2737007 Populus trichocarpa
Potri.003G022900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 2736008-2737007 Populus trichocarpa
Potri.003G022900 2.0kb upstream 2.0kb upstream 6901 true Chr03: 2729107-2736007 Populus trichocarpa
Potri.003G022900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 2729107-2731106 Populus trichocarpa
Potri.003G022900 2.0kb downstream 2.0kb downstream 6901 true Chr03: 2731107-2738007 Populus trichocarpa
Potri.003G022900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 2736008-2738007 Populus trichocarpa
Potri.003G022900 5.0kb upstream 5.0kb upstream 9901 true Chr03: 2726107-2736007 Populus trichocarpa
Potri.003G022900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 2726107-2731106 Populus trichocarpa
Potri.003G022900 5.0kb downstream 5.0kb downstream 9901 true Chr03: 2731107-2741007 Populus trichocarpa
Potri.003G022900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 2736008-2741007 Populus trichocarpa
Potri.003G022900 10.0kb upstream 10.0kb upstream 14901 true Chr03: 2721107-2736007 Populus trichocarpa
Potri.003G022900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 2721107-2731106 Populus trichocarpa
Potri.003G022900 10.0kb downstream 10.0kb downstream 14901 true Chr03: 2731107-2746007 Populus trichocarpa
Potri.003G022900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 2736008-2746007 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122411742 5262 Malpighiales View MSA
124206243 5268 Malvidae View MSA
123925222 5270 Rosid View MSA
123737560 5271 Pentapetalae View MSA
122787733 5272 Eudicot View MSA
122044178 5273 Angiosperm View MSA
121349595 5274 Embryophyte View MSA
123381370 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain