Gene : Potri.003G119600 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR31750:SF4 - PROTEIN STAY-GREEN 1, CHLOROPLASTIC-RELATED Genomic Order:  1256
Name:  ? Potri.003G119600 Secondary Identifier:  ? PAC:37235234

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G119600 0.5kb upstream 0.5kb upstream 2467 true Chr03: 14218195-14220661 Populus trichocarpa
Potri.003G119600 0.5kb upstream 0.5kb upstream 500 false Chr03: 14220162-14220661 Populus trichocarpa
Potri.003G119600 0.5kb downstream 0.5kb downstream 2467 true Chr03: 14217695-14220161 Populus trichocarpa
Potri.003G119600 0.5kb downstream 0.5kb downstream 500 false Chr03: 14217695-14218194 Populus trichocarpa
Potri.003G119600 1.0kb upstream 1.0kb upstream 2967 true Chr03: 14218195-14221161 Populus trichocarpa
Potri.003G119600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 14220162-14221161 Populus trichocarpa
Potri.003G119600 1.0kb downstream 1.0kb downstream 2967 true Chr03: 14217195-14220161 Populus trichocarpa
Potri.003G119600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 14217195-14218194 Populus trichocarpa
Potri.003G119600 2.0kb upstream 2.0kb upstream 3967 true Chr03: 14218195-14222161 Populus trichocarpa
Potri.003G119600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 14220162-14222161 Populus trichocarpa
Potri.003G119600 2.0kb downstream 2.0kb downstream 3967 true Chr03: 14216195-14220161 Populus trichocarpa
Potri.003G119600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 14216195-14218194 Populus trichocarpa
Potri.003G119600 5.0kb upstream 5.0kb upstream 6967 true Chr03: 14218195-14225161 Populus trichocarpa
Potri.003G119600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 14220162-14225161 Populus trichocarpa
Potri.003G119600 5.0kb downstream 5.0kb downstream 6967 true Chr03: 14213195-14220161 Populus trichocarpa
Potri.003G119600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 14213195-14218194 Populus trichocarpa
Potri.003G119600 10.0kb upstream 10.0kb upstream 11967 true Chr03: 14218195-14230161 Populus trichocarpa
Potri.003G119600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 14220162-14230161 Populus trichocarpa
Potri.003G119600 10.0kb downstream 10.0kb downstream 11967 true Chr03: 14208195-14220161 Populus trichocarpa
Potri.003G119600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 14208195-14218194 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453224 5262 Malpighiales View MSA
124253223 5268 Malvidae View MSA
124072601 5270 Rosid View MSA
123750963 5271 Pentapetalae View MSA
122786903 5272 Eudicot View MSA
122048162 5273 Angiosperm View MSA
121344176 5274 Embryophyte View MSA
123428548 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain