Gene : Potri.003G110901 P. trichocarpa v3.1
Defline:  (1 of 3) PTHR10969:SF39 - AUTOPHAGY-RELATED PROTEIN 8F Genomic Order:  1166
Name:  ? Potri.003G110901 Secondary Identifier:  ? PAC:37237334
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G110901 0.5kb upstream 0.5kb upstream 3392 true Chr03: 13446954-13450345 Populus trichocarpa
Potri.003G110901 0.5kb upstream 0.5kb upstream 500 false Chr03: 13446954-13447453 Populus trichocarpa
Potri.003G110901 0.5kb downstream 0.5kb downstream 3392 true Chr03: 13447454-13450845 Populus trichocarpa
Potri.003G110901 0.5kb downstream 0.5kb downstream 500 false Chr03: 13450346-13450845 Populus trichocarpa
Potri.003G110901 1.0kb upstream 1.0kb upstream 3892 true Chr03: 13446454-13450345 Populus trichocarpa
Potri.003G110901 1.0kb upstream 1.0kb upstream 1000 false Chr03: 13446454-13447453 Populus trichocarpa
Potri.003G110901 1.0kb downstream 1.0kb downstream 3892 true Chr03: 13447454-13451345 Populus trichocarpa
Potri.003G110901 1.0kb downstream 1.0kb downstream 1000 false Chr03: 13450346-13451345 Populus trichocarpa
Potri.003G110901 2.0kb upstream 2.0kb upstream 4892 true Chr03: 13445454-13450345 Populus trichocarpa
Potri.003G110901 2.0kb upstream 2.0kb upstream 2000 false Chr03: 13445454-13447453 Populus trichocarpa
Potri.003G110901 2.0kb downstream 2.0kb downstream 4892 true Chr03: 13447454-13452345 Populus trichocarpa
Potri.003G110901 2.0kb downstream 2.0kb downstream 2000 false Chr03: 13450346-13452345 Populus trichocarpa
Potri.003G110901 5.0kb upstream 5.0kb upstream 7892 true Chr03: 13442454-13450345 Populus trichocarpa
Potri.003G110901 5.0kb upstream 5.0kb upstream 5000 false Chr03: 13442454-13447453 Populus trichocarpa
Potri.003G110901 5.0kb downstream 5.0kb downstream 7892 true Chr03: 13447454-13455345 Populus trichocarpa
Potri.003G110901 5.0kb downstream 5.0kb downstream 5000 false Chr03: 13450346-13455345 Populus trichocarpa
Potri.003G110901 10.0kb upstream 10.0kb upstream 12892 true Chr03: 13437454-13450345 Populus trichocarpa
Potri.003G110901 10.0kb upstream 10.0kb upstream 10000 false Chr03: 13437454-13447453 Populus trichocarpa
Potri.003G110901 10.0kb downstream 10.0kb downstream 12892 true Chr03: 13447454-13460345 Populus trichocarpa
Potri.003G110901 10.0kb downstream 10.0kb downstream 10000 false Chr03: 13450346-13460345 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458753 5262 Malpighiales View MSA
124243893 5268 Malvidae View MSA
124068042 5270 Rosid View MSA
123752408 5271 Pentapetalae View MSA
122791477 5272 Eudicot View MSA
122048918 5273 Angiosperm View MSA
121349541 5274 Embryophyte View MSA
123427174 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain