Gene : Potri.003G111700 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR14969:SF13 - AT30094P Genomic Order:  1174
Name:  ? Potri.003G111700 Secondary Identifier:  ? PAC:37238529
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRIGLSYN-PWY Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G111700 0.5kb upstream 0.5kb upstream 3233 true Chr03: 13530042-13533274 Populus trichocarpa
Potri.003G111700 0.5kb upstream 0.5kb upstream 500 false Chr03: 13532775-13533274 Populus trichocarpa
Potri.003G111700 0.5kb downstream 0.5kb downstream 3233 true Chr03: 13529542-13532774 Populus trichocarpa
Potri.003G111700 0.5kb downstream 0.5kb downstream 500 false Chr03: 13529542-13530041 Populus trichocarpa
Potri.003G111700 1.0kb upstream 1.0kb upstream 3733 true Chr03: 13530042-13533774 Populus trichocarpa
Potri.003G111700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 13532775-13533774 Populus trichocarpa
Potri.003G111700 1.0kb downstream 1.0kb downstream 3733 true Chr03: 13529042-13532774 Populus trichocarpa
Potri.003G111700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 13529042-13530041 Populus trichocarpa
Potri.003G111700 2.0kb upstream 2.0kb upstream 4733 true Chr03: 13530042-13534774 Populus trichocarpa
Potri.003G111700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 13532775-13534774 Populus trichocarpa
Potri.003G111700 2.0kb downstream 2.0kb downstream 4733 true Chr03: 13528042-13532774 Populus trichocarpa
Potri.003G111700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 13528042-13530041 Populus trichocarpa
Potri.003G111700 5.0kb upstream 5.0kb upstream 7733 true Chr03: 13530042-13537774 Populus trichocarpa
Potri.003G111700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 13532775-13537774 Populus trichocarpa
Potri.003G111700 5.0kb downstream 5.0kb downstream 7733 true Chr03: 13525042-13532774 Populus trichocarpa
Potri.003G111700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 13525042-13530041 Populus trichocarpa
Potri.003G111700 10.0kb upstream 10.0kb upstream 12733 true Chr03: 13530042-13542774 Populus trichocarpa
Potri.003G111700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 13532775-13542774 Populus trichocarpa
Potri.003G111700 10.0kb downstream 10.0kb downstream 12733 true Chr03: 13520042-13532774 Populus trichocarpa
Potri.003G111700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 13520042-13530041 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450902 5262 Malpighiales View MSA
124243387 5268 Malvidae View MSA
124068093 5270 Rosid View MSA
123737030 5271 Pentapetalae View MSA
122788421 5272 Eudicot View MSA
122043486 5273 Angiosperm View MSA
121349083 5274 Embryophyte View MSA
123381157 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain