Gene : Potri.003G116500 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR31500:SF7 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN-RELATED Genomic Order:  1225
Name:  ? Potri.003G116500 Secondary Identifier:  ? PAC:37238835
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0 Pathways

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G116500 0.5kb upstream 0.5kb upstream 6021 true Chr03: 13973770-13979790 Populus trichocarpa
Potri.003G116500 0.5kb upstream 0.5kb upstream 500 false Chr03: 13979291-13979790 Populus trichocarpa
Potri.003G116500 0.5kb downstream 0.5kb downstream 6021 true Chr03: 13973270-13979290 Populus trichocarpa
Potri.003G116500 0.5kb downstream 0.5kb downstream 500 false Chr03: 13973270-13973769 Populus trichocarpa
Potri.003G116500 1.0kb upstream 1.0kb upstream 6521 true Chr03: 13973770-13980290 Populus trichocarpa
Potri.003G116500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 13979291-13980290 Populus trichocarpa
Potri.003G116500 1.0kb downstream 1.0kb downstream 6521 true Chr03: 13972770-13979290 Populus trichocarpa
Potri.003G116500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 13972770-13973769 Populus trichocarpa
Potri.003G116500 2.0kb upstream 2.0kb upstream 7521 true Chr03: 13973770-13981290 Populus trichocarpa
Potri.003G116500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 13979291-13981290 Populus trichocarpa
Potri.003G116500 2.0kb downstream 2.0kb downstream 7521 true Chr03: 13971770-13979290 Populus trichocarpa
Potri.003G116500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 13971770-13973769 Populus trichocarpa
Potri.003G116500 5.0kb upstream 5.0kb upstream 10521 true Chr03: 13973770-13984290 Populus trichocarpa
Potri.003G116500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 13979291-13984290 Populus trichocarpa
Potri.003G116500 5.0kb downstream 5.0kb downstream 10521 true Chr03: 13968770-13979290 Populus trichocarpa
Potri.003G116500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 13968770-13973769 Populus trichocarpa
Potri.003G116500 10.0kb upstream 10.0kb upstream 15521 true Chr03: 13973770-13989290 Populus trichocarpa
Potri.003G116500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 13979291-13989290 Populus trichocarpa
Potri.003G116500 10.0kb downstream 10.0kb downstream 15521 true Chr03: 13963770-13979290 Populus trichocarpa
Potri.003G116500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 13963770-13973769 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122402992 5262 Malpighiales View MSA
124248140 5268 Malvidae View MSA
124071035 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain