Gene : Potri.003G106000 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR12121:SF42 - CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 4-RELATED Genomic Order:  1114
Name:  ? Potri.003G106000 Secondary Identifier:  ? PAC:37237788
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G106000 0.5kb upstream 0.5kb upstream 6448 true Chr03: 13008293-13014740 Populus trichocarpa
Potri.003G106000 0.5kb upstream 0.5kb upstream 500 false Chr03: 13014241-13014740 Populus trichocarpa
Potri.003G106000 0.5kb downstream 0.5kb downstream 6448 true Chr03: 13007793-13014240 Populus trichocarpa
Potri.003G106000 0.5kb downstream 0.5kb downstream 500 false Chr03: 13007793-13008292 Populus trichocarpa
Potri.003G106000 1.0kb upstream 1.0kb upstream 6948 true Chr03: 13008293-13015240 Populus trichocarpa
Potri.003G106000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 13014241-13015240 Populus trichocarpa
Potri.003G106000 1.0kb downstream 1.0kb downstream 6948 true Chr03: 13007293-13014240 Populus trichocarpa
Potri.003G106000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 13007293-13008292 Populus trichocarpa
Potri.003G106000 2.0kb upstream 2.0kb upstream 7948 true Chr03: 13008293-13016240 Populus trichocarpa
Potri.003G106000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 13014241-13016240 Populus trichocarpa
Potri.003G106000 2.0kb downstream 2.0kb downstream 7948 true Chr03: 13006293-13014240 Populus trichocarpa
Potri.003G106000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 13006293-13008292 Populus trichocarpa
Potri.003G106000 5.0kb upstream 5.0kb upstream 10948 true Chr03: 13008293-13019240 Populus trichocarpa
Potri.003G106000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 13014241-13019240 Populus trichocarpa
Potri.003G106000 5.0kb downstream 5.0kb downstream 10948 true Chr03: 13003293-13014240 Populus trichocarpa
Potri.003G106000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 13003293-13008292 Populus trichocarpa
Potri.003G106000 10.0kb upstream 10.0kb upstream 15948 true Chr03: 13008293-13024240 Populus trichocarpa
Potri.003G106000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 13014241-13024240 Populus trichocarpa
Potri.003G106000 10.0kb downstream 10.0kb downstream 15948 true Chr03: 12998293-13014240 Populus trichocarpa
Potri.003G106000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 12998293-13008292 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460158 5262 Malpighiales View MSA
124240125 5268 Malvidae View MSA
124063704 5270 Rosid View MSA
123740747 5271 Pentapetalae View MSA
122787902 5272 Eudicot View MSA
122047277 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain