Gene : Potri.003G092600 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR12510//PTHR12510:SF7 - TROPONIN C-AKIN-1 PROTEIN // AIG2-LIKE (AVIRULENCE INDUCED GENE) FAMILY PROTEIN Genomic Order:  977
Name:  ? Potri.003G092600 Secondary Identifier:  ? PAC:37237919
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G092600 0.5kb upstream 0.5kb upstream 1303 true Chr03: 11963590-11964892 Populus trichocarpa
Potri.003G092600 0.5kb upstream 0.5kb upstream 500 false Chr03: 11964393-11964892 Populus trichocarpa
Potri.003G092600 0.5kb downstream 0.5kb downstream 1303 true Chr03: 11963090-11964392 Populus trichocarpa
Potri.003G092600 0.5kb downstream 0.5kb downstream 500 false Chr03: 11963090-11963589 Populus trichocarpa
Potri.003G092600 1.0kb upstream 1.0kb upstream 1803 true Chr03: 11963590-11965392 Populus trichocarpa
Potri.003G092600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 11964393-11965392 Populus trichocarpa
Potri.003G092600 1.0kb downstream 1.0kb downstream 1803 true Chr03: 11962590-11964392 Populus trichocarpa
Potri.003G092600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 11962590-11963589 Populus trichocarpa
Potri.003G092600 2.0kb upstream 2.0kb upstream 2803 true Chr03: 11963590-11966392 Populus trichocarpa
Potri.003G092600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 11964393-11966392 Populus trichocarpa
Potri.003G092600 2.0kb downstream 2.0kb downstream 2803 true Chr03: 11961590-11964392 Populus trichocarpa
Potri.003G092600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 11961590-11963589 Populus trichocarpa
Potri.003G092600 5.0kb upstream 5.0kb upstream 5803 true Chr03: 11963590-11969392 Populus trichocarpa
Potri.003G092600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 11964393-11969392 Populus trichocarpa
Potri.003G092600 5.0kb downstream 5.0kb downstream 5803 true Chr03: 11958590-11964392 Populus trichocarpa
Potri.003G092600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 11958590-11963589 Populus trichocarpa
Potri.003G092600 10.0kb upstream 10.0kb upstream 10803 true Chr03: 11963590-11974392 Populus trichocarpa
Potri.003G092600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 11964393-11974392 Populus trichocarpa
Potri.003G092600 10.0kb downstream 10.0kb downstream 10803 true Chr03: 11953590-11964392 Populus trichocarpa
Potri.003G092600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 11953590-11963589 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122460162 5262 Malpighiales View MSA
124246677 5268 Malvidae View MSA
124068981 5270 Rosid View MSA
123739827 5271 Pentapetalae View MSA
122789137 5272 Eudicot View MSA
122047462 5273 Angiosperm View MSA
121349435 5274 Embryophyte View MSA
123425179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain