Gene : Potri.003G090900 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR31500//PTHR31500:SF17 - FAMILY NOT NAMED // AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  960
Name:  ? Potri.003G090900 Secondary Identifier:  ? PAC:37238838

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G090900 0.5kb upstream 0.5kb upstream 8658 true Chr03: 11755482-11764139 Populus trichocarpa
Potri.003G090900 0.5kb upstream 0.5kb upstream 500 false Chr03: 11755482-11755981 Populus trichocarpa
Potri.003G090900 0.5kb downstream 0.5kb downstream 8658 true Chr03: 11755982-11764639 Populus trichocarpa
Potri.003G090900 0.5kb downstream 0.5kb downstream 500 false Chr03: 11764140-11764639 Populus trichocarpa
Potri.003G090900 1.0kb upstream 1.0kb upstream 9158 true Chr03: 11754982-11764139 Populus trichocarpa
Potri.003G090900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 11754982-11755981 Populus trichocarpa
Potri.003G090900 1.0kb downstream 1.0kb downstream 9158 true Chr03: 11755982-11765139 Populus trichocarpa
Potri.003G090900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 11764140-11765139 Populus trichocarpa
Potri.003G090900 2.0kb upstream 2.0kb upstream 10158 true Chr03: 11753982-11764139 Populus trichocarpa
Potri.003G090900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 11753982-11755981 Populus trichocarpa
Potri.003G090900 2.0kb downstream 2.0kb downstream 10158 true Chr03: 11755982-11766139 Populus trichocarpa
Potri.003G090900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 11764140-11766139 Populus trichocarpa
Potri.003G090900 5.0kb upstream 5.0kb upstream 13158 true Chr03: 11750982-11764139 Populus trichocarpa
Potri.003G090900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 11750982-11755981 Populus trichocarpa
Potri.003G090900 5.0kb downstream 5.0kb downstream 13158 true Chr03: 11755982-11769139 Populus trichocarpa
Potri.003G090900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 11764140-11769139 Populus trichocarpa
Potri.003G090900 10.0kb upstream 10.0kb upstream 18158 true Chr03: 11745982-11764139 Populus trichocarpa
Potri.003G090900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 11745982-11755981 Populus trichocarpa
Potri.003G090900 10.0kb downstream 10.0kb downstream 18158 true Chr03: 11755982-11774139 Populus trichocarpa
Potri.003G090900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 11764140-11774139 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450056 5262 Malpighiales View MSA
124250687 5268 Malvidae View MSA
124064410 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain