Gene : Potri.003G175200 P. trichocarpa v3.1
Defline:  (1 of 27) PF05938 - Plant self-incompatibility protein S1 (Self-incomp_S1) Genomic Order:  1829
Name:  ? Potri.003G175200 Secondary Identifier:  ? PAC:37238512
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G175200 0.5kb upstream 0.5kb upstream 869 true Chr03: 18381440-18382308 Populus trichocarpa
Potri.003G175200 0.5kb upstream 0.5kb upstream 500 false Chr03: 18381809-18382308 Populus trichocarpa
Potri.003G175200 0.5kb downstream 0.5kb downstream 869 true Chr03: 18380940-18381808 Populus trichocarpa
Potri.003G175200 0.5kb downstream 0.5kb downstream 500 false Chr03: 18380940-18381439 Populus trichocarpa
Potri.003G175200 1.0kb upstream 1.0kb upstream 1369 true Chr03: 18381440-18382808 Populus trichocarpa
Potri.003G175200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 18381809-18382808 Populus trichocarpa
Potri.003G175200 1.0kb downstream 1.0kb downstream 1369 true Chr03: 18380440-18381808 Populus trichocarpa
Potri.003G175200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 18380440-18381439 Populus trichocarpa
Potri.003G175200 2.0kb upstream 2.0kb upstream 2369 true Chr03: 18381440-18383808 Populus trichocarpa
Potri.003G175200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 18381809-18383808 Populus trichocarpa
Potri.003G175200 2.0kb downstream 2.0kb downstream 2369 true Chr03: 18379440-18381808 Populus trichocarpa
Potri.003G175200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 18379440-18381439 Populus trichocarpa
Potri.003G175200 5.0kb upstream 5.0kb upstream 5369 true Chr03: 18381440-18386808 Populus trichocarpa
Potri.003G175200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 18381809-18386808 Populus trichocarpa
Potri.003G175200 5.0kb downstream 5.0kb downstream 5369 true Chr03: 18376440-18381808 Populus trichocarpa
Potri.003G175200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 18376440-18381439 Populus trichocarpa
Potri.003G175200 10.0kb upstream 10.0kb upstream 10369 true Chr03: 18381440-18391808 Populus trichocarpa
Potri.003G175200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 18381809-18391808 Populus trichocarpa
Potri.003G175200 10.0kb downstream 10.0kb downstream 10369 true Chr03: 18371440-18381808 Populus trichocarpa
Potri.003G175200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 18371440-18381439 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464502 5262 Malpighiales View MSA
124253811 5268 Malvidae View MSA
124072251 5270 Rosid View MSA
123752988 5271 Pentapetalae View MSA
122797955 5272 Eudicot View MSA
122045805 5273 Angiosperm View MSA
121350645 5274 Embryophyte View MSA
123381836 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain