Gene : Potri.003G171900 P. trichocarpa v3.1
Defline:  (1 of 1) 1.14.11.33//4.2.99.18 - DNA oxidative demethylase / Alkylated DNA repair protein // DNA-(apurinic or apyrimidinic site) lyase / Phage-T4 UV endonuclease Genomic Order:  1792
Name:  ? Potri.003G171900 Secondary Identifier:  ? PAC:37237657
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G171900 0.5kb upstream 0.5kb upstream 4108 true Chr03: 18175584-18179691 Populus trichocarpa
Potri.003G171900 0.5kb upstream 0.5kb upstream 500 false Chr03: 18179192-18179691 Populus trichocarpa
Potri.003G171900 0.5kb downstream 0.5kb downstream 4108 true Chr03: 18175084-18179191 Populus trichocarpa
Potri.003G171900 0.5kb downstream 0.5kb downstream 500 false Chr03: 18175084-18175583 Populus trichocarpa
Potri.003G171900 1.0kb upstream 1.0kb upstream 4608 true Chr03: 18175584-18180191 Populus trichocarpa
Potri.003G171900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 18179192-18180191 Populus trichocarpa
Potri.003G171900 1.0kb downstream 1.0kb downstream 4608 true Chr03: 18174584-18179191 Populus trichocarpa
Potri.003G171900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 18174584-18175583 Populus trichocarpa
Potri.003G171900 2.0kb upstream 2.0kb upstream 5608 true Chr03: 18175584-18181191 Populus trichocarpa
Potri.003G171900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 18179192-18181191 Populus trichocarpa
Potri.003G171900 2.0kb downstream 2.0kb downstream 5608 true Chr03: 18173584-18179191 Populus trichocarpa
Potri.003G171900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 18173584-18175583 Populus trichocarpa
Potri.003G171900 5.0kb upstream 5.0kb upstream 8608 true Chr03: 18175584-18184191 Populus trichocarpa
Potri.003G171900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 18179192-18184191 Populus trichocarpa
Potri.003G171900 5.0kb downstream 5.0kb downstream 8608 true Chr03: 18170584-18179191 Populus trichocarpa
Potri.003G171900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 18170584-18175583 Populus trichocarpa
Potri.003G171900 10.0kb upstream 10.0kb upstream 13608 true Chr03: 18175584-18189191 Populus trichocarpa
Potri.003G171900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 18179192-18189191 Populus trichocarpa
Potri.003G171900 10.0kb downstream 10.0kb downstream 13608 true Chr03: 18165584-18179191 Populus trichocarpa
Potri.003G171900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 18165584-18175583 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457976 5262 Malpighiales View MSA
124237124 5268 Malvidae View MSA
124069027 5270 Rosid View MSA
123737272 5271 Pentapetalae View MSA
122785941 5272 Eudicot View MSA
122044879 5273 Angiosperm View MSA
121344923 5274 Embryophyte View MSA
123425704 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain