Gene : Potri.003G162200 P. trichocarpa v3.1
Defline:  (1 of 2) K00411 - ubiquinol-cytochrome c reductase iron-sulfur subunit (UQCRFS1, RIP1, petA) Genomic Order:  1694
Name:  ? Potri.003G162200 Secondary Identifier:  ? PAC:37235525
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-3781 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7279 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G162200 0.5kb upstream 0.5kb upstream 3670 true Chr03: 17306071-17309740 Populus trichocarpa
Potri.003G162200 0.5kb upstream 0.5kb upstream 500 false Chr03: 17309241-17309740 Populus trichocarpa
Potri.003G162200 0.5kb downstream 0.5kb downstream 3670 true Chr03: 17305571-17309240 Populus trichocarpa
Potri.003G162200 0.5kb downstream 0.5kb downstream 500 false Chr03: 17305571-17306070 Populus trichocarpa
Potri.003G162200 1.0kb upstream 1.0kb upstream 4170 true Chr03: 17306071-17310240 Populus trichocarpa
Potri.003G162200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 17309241-17310240 Populus trichocarpa
Potri.003G162200 1.0kb downstream 1.0kb downstream 4170 true Chr03: 17305071-17309240 Populus trichocarpa
Potri.003G162200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 17305071-17306070 Populus trichocarpa
Potri.003G162200 2.0kb upstream 2.0kb upstream 5170 true Chr03: 17306071-17311240 Populus trichocarpa
Potri.003G162200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 17309241-17311240 Populus trichocarpa
Potri.003G162200 2.0kb downstream 2.0kb downstream 5170 true Chr03: 17304071-17309240 Populus trichocarpa
Potri.003G162200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 17304071-17306070 Populus trichocarpa
Potri.003G162200 5.0kb upstream 5.0kb upstream 8170 true Chr03: 17306071-17314240 Populus trichocarpa
Potri.003G162200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 17309241-17314240 Populus trichocarpa
Potri.003G162200 5.0kb downstream 5.0kb downstream 8170 true Chr03: 17301071-17309240 Populus trichocarpa
Potri.003G162200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 17301071-17306070 Populus trichocarpa
Potri.003G162200 10.0kb upstream 10.0kb upstream 13170 true Chr03: 17306071-17319240 Populus trichocarpa
Potri.003G162200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 17309241-17319240 Populus trichocarpa
Potri.003G162200 10.0kb downstream 10.0kb downstream 13170 true Chr03: 17296071-17309240 Populus trichocarpa
Potri.003G162200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 17296071-17306070 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122462389 5262 Malpighiales View MSA
124250960 5268 Malvidae View MSA
124070196 5270 Rosid View MSA
123743313 5271 Pentapetalae View MSA
122789519 5272 Eudicot View MSA
122049860 5273 Angiosperm View MSA
121345913 5274 Embryophyte View MSA
123424462 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain