Gene : Potri.003G162000 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR11062:SF105 - BETA-1,4-XYLOSYLTRANSFERASE IRX10-RELATED Genomic Order:  1692
Name:  ? Potri.003G162000 Secondary Identifier:  ? PAC:37236259
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5980 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G162000 0.5kb upstream 0.5kb upstream 4346 true Chr03: 17296689-17301034 Populus trichocarpa
Potri.003G162000 0.5kb upstream 0.5kb upstream 500 false Chr03: 17300535-17301034 Populus trichocarpa
Potri.003G162000 0.5kb downstream 0.5kb downstream 4346 true Chr03: 17296189-17300534 Populus trichocarpa
Potri.003G162000 0.5kb downstream 0.5kb downstream 500 false Chr03: 17296189-17296688 Populus trichocarpa
Potri.003G162000 1.0kb upstream 1.0kb upstream 4846 true Chr03: 17296689-17301534 Populus trichocarpa
Potri.003G162000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 17300535-17301534 Populus trichocarpa
Potri.003G162000 1.0kb downstream 1.0kb downstream 4846 true Chr03: 17295689-17300534 Populus trichocarpa
Potri.003G162000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 17295689-17296688 Populus trichocarpa
Potri.003G162000 2.0kb upstream 2.0kb upstream 5846 true Chr03: 17296689-17302534 Populus trichocarpa
Potri.003G162000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 17300535-17302534 Populus trichocarpa
Potri.003G162000 2.0kb downstream 2.0kb downstream 5846 true Chr03: 17294689-17300534 Populus trichocarpa
Potri.003G162000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 17294689-17296688 Populus trichocarpa
Potri.003G162000 5.0kb upstream 5.0kb upstream 8846 true Chr03: 17296689-17305534 Populus trichocarpa
Potri.003G162000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 17300535-17305534 Populus trichocarpa
Potri.003G162000 5.0kb downstream 5.0kb downstream 8846 true Chr03: 17291689-17300534 Populus trichocarpa
Potri.003G162000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 17291689-17296688 Populus trichocarpa
Potri.003G162000 10.0kb upstream 10.0kb upstream 13846 true Chr03: 17296689-17310534 Populus trichocarpa
Potri.003G162000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 17300535-17310534 Populus trichocarpa
Potri.003G162000 10.0kb downstream 10.0kb downstream 13846 true Chr03: 17286689-17300534 Populus trichocarpa
Potri.003G162000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 17286689-17296688 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452103 5262 Malpighiales View MSA
124244464 5268 Malvidae View MSA
124072304 5270 Rosid View MSA
123741163 5271 Pentapetalae View MSA
122792713 5272 Eudicot View MSA
122045479 5273 Angiosperm View MSA
121345748 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain