Gene : Potri.003G142400 P. trichocarpa v3.1
Defline:  (1 of 5) PTHR13301:SF51 - CELLULOSE SYNTHASE-LIKE PROTEIN G1-RELATED Genomic Order:  1490
Name:  ? Potri.003G142400 Secondary Identifier:  ? PAC:37235537
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1001 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G142400 0.5kb upstream 0.5kb upstream 6813 true Chr03: 15905204-15912016 Populus trichocarpa
Potri.003G142400 0.5kb upstream 0.5kb upstream 500 false Chr03: 15905204-15905703 Populus trichocarpa
Potri.003G142400 0.5kb downstream 0.5kb downstream 6813 true Chr03: 15905704-15912516 Populus trichocarpa
Potri.003G142400 0.5kb downstream 0.5kb downstream 500 false Chr03: 15912017-15912516 Populus trichocarpa
Potri.003G142400 1.0kb upstream 1.0kb upstream 7313 true Chr03: 15904704-15912016 Populus trichocarpa
Potri.003G142400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 15904704-15905703 Populus trichocarpa
Potri.003G142400 1.0kb downstream 1.0kb downstream 7313 true Chr03: 15905704-15913016 Populus trichocarpa
Potri.003G142400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 15912017-15913016 Populus trichocarpa
Potri.003G142400 2.0kb upstream 2.0kb upstream 8313 true Chr03: 15903704-15912016 Populus trichocarpa
Potri.003G142400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 15903704-15905703 Populus trichocarpa
Potri.003G142400 2.0kb downstream 2.0kb downstream 8313 true Chr03: 15905704-15914016 Populus trichocarpa
Potri.003G142400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 15912017-15914016 Populus trichocarpa
Potri.003G142400 5.0kb upstream 5.0kb upstream 11313 true Chr03: 15900704-15912016 Populus trichocarpa
Potri.003G142400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 15900704-15905703 Populus trichocarpa
Potri.003G142400 5.0kb downstream 5.0kb downstream 11313 true Chr03: 15905704-15917016 Populus trichocarpa
Potri.003G142400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 15912017-15917016 Populus trichocarpa
Potri.003G142400 10.0kb upstream 10.0kb upstream 16313 true Chr03: 15895704-15912016 Populus trichocarpa
Potri.003G142400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 15895704-15905703 Populus trichocarpa
Potri.003G142400 10.0kb downstream 10.0kb downstream 16313 true Chr03: 15905704-15922016 Populus trichocarpa
Potri.003G142400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 15912017-15922016 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122393500 5262 Malpighiales View MSA
124240954 5268 Malvidae View MSA
124070260 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain