Gene : Potri.003G132400 P. trichocarpa v3.1
Defline:  (1 of 2) 4.6.1.12 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase / MECDP-synthase Genomic Order:  1390
Name:  ? Potri.003G132400 Secondary Identifier:  ? PAC:37237231
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7560 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G132400 0.5kb upstream 0.5kb upstream 3747 true Chr03: 15186567-15190313 Populus trichocarpa
Potri.003G132400 0.5kb upstream 0.5kb upstream 500 false Chr03: 15189814-15190313 Populus trichocarpa
Potri.003G132400 0.5kb downstream 0.5kb downstream 3747 true Chr03: 15186067-15189813 Populus trichocarpa
Potri.003G132400 0.5kb downstream 0.5kb downstream 500 false Chr03: 15186067-15186566 Populus trichocarpa
Potri.003G132400 1.0kb upstream 1.0kb upstream 4247 true Chr03: 15186567-15190813 Populus trichocarpa
Potri.003G132400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 15189814-15190813 Populus trichocarpa
Potri.003G132400 1.0kb downstream 1.0kb downstream 4247 true Chr03: 15185567-15189813 Populus trichocarpa
Potri.003G132400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 15185567-15186566 Populus trichocarpa
Potri.003G132400 2.0kb upstream 2.0kb upstream 5247 true Chr03: 15186567-15191813 Populus trichocarpa
Potri.003G132400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 15189814-15191813 Populus trichocarpa
Potri.003G132400 2.0kb downstream 2.0kb downstream 5247 true Chr03: 15184567-15189813 Populus trichocarpa
Potri.003G132400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 15184567-15186566 Populus trichocarpa
Potri.003G132400 5.0kb upstream 5.0kb upstream 8247 true Chr03: 15186567-15194813 Populus trichocarpa
Potri.003G132400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 15189814-15194813 Populus trichocarpa
Potri.003G132400 5.0kb downstream 5.0kb downstream 8247 true Chr03: 15181567-15189813 Populus trichocarpa
Potri.003G132400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 15181567-15186566 Populus trichocarpa
Potri.003G132400 10.0kb upstream 10.0kb upstream 13247 true Chr03: 15186567-15199813 Populus trichocarpa
Potri.003G132400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 15189814-15199813 Populus trichocarpa
Potri.003G132400 10.0kb downstream 10.0kb downstream 13247 true Chr03: 15176567-15189813 Populus trichocarpa
Potri.003G132400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 15176567-15186566 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464102 5262 Malpighiales View MSA
124238483 5268 Malvidae View MSA
124062148 5270 Rosid View MSA
123737612 5271 Pentapetalae View MSA
122786124 5272 Eudicot View MSA
122042234 5273 Angiosperm View MSA
121344039 5274 Embryophyte View MSA
123423768 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain