Gene : Potri.004G020300 P. trichocarpa v3.1

Defline:  (1 of 4) K14400 - pre-mRNA cleavage complex 2 protein Pcf11 (PCF11) Genomic Order:  199
Name:  ? Potri.004G020300 Secondary Identifier:  ? PAC:37231199

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G020300 0.5kb upstream 0.5kb upstream 7632 true Chr04: 1360429-1368060 Populus trichocarpa
Potri.004G020300 0.5kb upstream 0.5kb upstream 500 false Chr04: 1360429-1360928 Populus trichocarpa
Potri.004G020300 0.5kb downstream 0.5kb downstream 7632 true Chr04: 1360929-1368560 Populus trichocarpa
Potri.004G020300 0.5kb downstream 0.5kb downstream 500 false Chr04: 1368061-1368560 Populus trichocarpa
Potri.004G020300 1.0kb upstream 1.0kb upstream 8132 true Chr04: 1359929-1368060 Populus trichocarpa
Potri.004G020300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 1359929-1360928 Populus trichocarpa
Potri.004G020300 1.0kb downstream 1.0kb downstream 8132 true Chr04: 1360929-1369060 Populus trichocarpa
Potri.004G020300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 1368061-1369060 Populus trichocarpa
Potri.004G020300 2.0kb upstream 2.0kb upstream 9132 true Chr04: 1358929-1368060 Populus trichocarpa
Potri.004G020300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 1358929-1360928 Populus trichocarpa
Potri.004G020300 2.0kb downstream 2.0kb downstream 9132 true Chr04: 1360929-1370060 Populus trichocarpa
Potri.004G020300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 1368061-1370060 Populus trichocarpa
Potri.004G020300 5.0kb upstream 5.0kb upstream 12132 true Chr04: 1355929-1368060 Populus trichocarpa
Potri.004G020300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 1355929-1360928 Populus trichocarpa
Potri.004G020300 5.0kb downstream 5.0kb downstream 12132 true Chr04: 1360929-1373060 Populus trichocarpa
Potri.004G020300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 1368061-1373060 Populus trichocarpa
Potri.004G020300 10.0kb upstream 10.0kb upstream 17132 true Chr04: 1350929-1368060 Populus trichocarpa
Potri.004G020300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 1350929-1360928 Populus trichocarpa
Potri.004G020300 10.0kb downstream 10.0kb downstream 17132 true Chr04: 1360929-1378060 Populus trichocarpa
Potri.004G020300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 1368061-1378060 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451476 5262 Malpighiales View MSA
124240765 5268 Malvidae View MSA
124072237 5270 Rosid View MSA
123741427 5271 Pentapetalae View MSA
122796233 5272 Eudicot View MSA
122048698 5273 Angiosperm View MSA
121349751 5274 Embryophyte View MSA
123426332 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain