Gene : Potri.003G222800 P. trichocarpa v3.1
Defline:  (1 of 1) K00167 - 2-oxoisovalerate dehydrogenase E1 component beta subunit (BCKDHB, bkdA2) Genomic Order:  2325
Name:  ? Potri.003G222800 Secondary Identifier:  ? PAC:37238289
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5046 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G222800 0.5kb upstream 0.5kb upstream 4675 true Chr03: 21704430-21709104 Populus trichocarpa
Potri.003G222800 0.5kb upstream 0.5kb upstream 500 false Chr03: 21704430-21704929 Populus trichocarpa
Potri.003G222800 0.5kb downstream 0.5kb downstream 4675 true Chr03: 21704930-21709604 Populus trichocarpa
Potri.003G222800 0.5kb downstream 0.5kb downstream 500 false Chr03: 21709105-21709604 Populus trichocarpa
Potri.003G222800 1.0kb upstream 1.0kb upstream 5175 true Chr03: 21703930-21709104 Populus trichocarpa
Potri.003G222800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 21703930-21704929 Populus trichocarpa
Potri.003G222800 1.0kb downstream 1.0kb downstream 5175 true Chr03: 21704930-21710104 Populus trichocarpa
Potri.003G222800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 21709105-21710104 Populus trichocarpa
Potri.003G222800 2.0kb upstream 2.0kb upstream 6175 true Chr03: 21702930-21709104 Populus trichocarpa
Potri.003G222800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 21702930-21704929 Populus trichocarpa
Potri.003G222800 2.0kb downstream 2.0kb downstream 6175 true Chr03: 21704930-21711104 Populus trichocarpa
Potri.003G222800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 21709105-21711104 Populus trichocarpa
Potri.003G222800 5.0kb upstream 5.0kb upstream 9175 true Chr03: 21699930-21709104 Populus trichocarpa
Potri.003G222800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 21699930-21704929 Populus trichocarpa
Potri.003G222800 5.0kb downstream 5.0kb downstream 9175 true Chr03: 21704930-21714104 Populus trichocarpa
Potri.003G222800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 21709105-21714104 Populus trichocarpa
Potri.003G222800 10.0kb upstream 10.0kb upstream 14175 true Chr03: 21694930-21709104 Populus trichocarpa
Potri.003G222800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 21694930-21704929 Populus trichocarpa
Potri.003G222800 10.0kb downstream 10.0kb downstream 14175 true Chr03: 21704930-21719104 Populus trichocarpa
Potri.003G222800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 21709105-21719104 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449808 5262 Malpighiales View MSA
124243640 5268 Malvidae View MSA
124067270 5270 Rosid View MSA
123743874 5271 Pentapetalae View MSA
122787684 5272 Eudicot View MSA
122046166 5273 Angiosperm View MSA
121344271 5274 Embryophyte View MSA
123424966 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain