Gene : Potri.003G198600 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR10315//PTHR10315:SF29 - SEVEN IN ABSENTIA HOMOLOG // SUBFAMILY NOT NAMED Genomic Order:  2064
Name:  ? Potri.003G198600 Secondary Identifier:  ? PAC:37237766
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-7511 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.003G198600 0.5kb upstream 0.5kb upstream 4840 true Chr03: 20105067-20109906 Populus trichocarpa
Potri.003G198600 0.5kb upstream 0.5kb upstream 500 false Chr03: 20109407-20109906 Populus trichocarpa
Potri.003G198600 0.5kb downstream 0.5kb downstream 4840 true Chr03: 20104567-20109406 Populus trichocarpa
Potri.003G198600 0.5kb downstream 0.5kb downstream 500 false Chr03: 20104567-20105066 Populus trichocarpa
Potri.003G198600 1.0kb upstream 1.0kb upstream 5340 true Chr03: 20105067-20110406 Populus trichocarpa
Potri.003G198600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 20109407-20110406 Populus trichocarpa
Potri.003G198600 1.0kb downstream 1.0kb downstream 5340 true Chr03: 20104067-20109406 Populus trichocarpa
Potri.003G198600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 20104067-20105066 Populus trichocarpa
Potri.003G198600 2.0kb upstream 2.0kb upstream 6340 true Chr03: 20105067-20111406 Populus trichocarpa
Potri.003G198600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 20109407-20111406 Populus trichocarpa
Potri.003G198600 2.0kb downstream 2.0kb downstream 6340 true Chr03: 20103067-20109406 Populus trichocarpa
Potri.003G198600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 20103067-20105066 Populus trichocarpa
Potri.003G198600 5.0kb upstream 5.0kb upstream 9340 true Chr03: 20105067-20114406 Populus trichocarpa
Potri.003G198600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 20109407-20114406 Populus trichocarpa
Potri.003G198600 5.0kb downstream 5.0kb downstream 9340 true Chr03: 20100067-20109406 Populus trichocarpa
Potri.003G198600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 20100067-20105066 Populus trichocarpa
Potri.003G198600 10.0kb upstream 10.0kb upstream 14340 true Chr03: 20105067-20119406 Populus trichocarpa
Potri.003G198600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 20109407-20119406 Populus trichocarpa
Potri.003G198600 10.0kb downstream 10.0kb downstream 14340 true Chr03: 20095067-20109406 Populus trichocarpa
Potri.003G198600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 20095067-20105066 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454997 5262 Malpighiales View MSA
124246275 5268 Malvidae View MSA
124069632 5270 Rosid View MSA
123750736 5271 Pentapetalae View MSA
122797657 5272 Eudicot View MSA
122049350 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain