Gene : Potri.004G054200 P. trichocarpa v3.1
Defline:  (1 of 11) K00026 - malate dehydrogenase (MDH2) Genomic Order:  540
Name:  ? Potri.004G054200 Secondary Identifier:  ? PAC:37231778
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7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa GLUCONEO-PWY Populus trichocarpa pathologic  
Ptrichocarpa GLYOXYLATE-BYPASS Populus trichocarpa pathologic  
Ptrichocarpa PWY-5464 Populus trichocarpa pathologic  
Ptrichocarpa PWY-561 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5690 Populus trichocarpa pathologic  
Ptrichocarpa PWY66-399 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7115 Populus trichocarpa pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G054200 0.5kb upstream 0.5kb upstream 2951 true Chr04: 4248291-4251241 Populus trichocarpa
Potri.004G054200 0.5kb upstream 0.5kb upstream 500 false Chr04: 4248291-4248790 Populus trichocarpa
Potri.004G054200 0.5kb downstream 0.5kb downstream 2951 true Chr04: 4248791-4251741 Populus trichocarpa
Potri.004G054200 0.5kb downstream 0.5kb downstream 500 false Chr04: 4251242-4251741 Populus trichocarpa
Potri.004G054200 1.0kb upstream 1.0kb upstream 3451 true Chr04: 4247791-4251241 Populus trichocarpa
Potri.004G054200 1.0kb upstream 1.0kb upstream 1000 false Chr04: 4247791-4248790 Populus trichocarpa
Potri.004G054200 1.0kb downstream 1.0kb downstream 3451 true Chr04: 4248791-4252241 Populus trichocarpa
Potri.004G054200 1.0kb downstream 1.0kb downstream 1000 false Chr04: 4251242-4252241 Populus trichocarpa
Potri.004G054200 2.0kb upstream 2.0kb upstream 4451 true Chr04: 4246791-4251241 Populus trichocarpa
Potri.004G054200 2.0kb upstream 2.0kb upstream 2000 false Chr04: 4246791-4248790 Populus trichocarpa
Potri.004G054200 2.0kb downstream 2.0kb downstream 4451 true Chr04: 4248791-4253241 Populus trichocarpa
Potri.004G054200 2.0kb downstream 2.0kb downstream 2000 false Chr04: 4251242-4253241 Populus trichocarpa
Potri.004G054200 5.0kb upstream 5.0kb upstream 7451 true Chr04: 4243791-4251241 Populus trichocarpa
Potri.004G054200 5.0kb upstream 5.0kb upstream 5000 false Chr04: 4243791-4248790 Populus trichocarpa
Potri.004G054200 5.0kb downstream 5.0kb downstream 7451 true Chr04: 4248791-4256241 Populus trichocarpa
Potri.004G054200 5.0kb downstream 5.0kb downstream 5000 false Chr04: 4251242-4256241 Populus trichocarpa
Potri.004G054200 10.0kb upstream 10.0kb upstream 12451 true Chr04: 4238791-4251241 Populus trichocarpa
Potri.004G054200 10.0kb upstream 10.0kb upstream 10000 false Chr04: 4238791-4248790 Populus trichocarpa
Potri.004G054200 10.0kb downstream 10.0kb downstream 12451 true Chr04: 4248791-4261241 Populus trichocarpa
Potri.004G054200 10.0kb downstream 10.0kb downstream 10000 false Chr04: 4251242-4261241 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122449572 5262 Malpighiales View MSA
124249329 5268 Malvidae View MSA
124072115 5270 Rosid View MSA
123744980 5271 Pentapetalae View MSA
122794194 5272 Eudicot View MSA
122042635 5273 Angiosperm View MSA
121345492 5274 Embryophyte View MSA
123423974 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain