Gene : Potri.004G043700 P. trichocarpa v3.1
Defline:  (1 of 4) K00053 - ketol-acid reductoisomerase (ilvC) Genomic Order:  434
Name:  ? Potri.004G043700 Secondary Identifier:  ? PAC:37231493
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4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa BRANCHED-CHAIN-AA-SYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa ILEUSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-3001 Populus trichocarpa pathologic  
Ptrichocarpa VALSYN-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G043700 0.5kb upstream 0.5kb upstream 6235 true Chr04: 3307316-3313550 Populus trichocarpa
Potri.004G043700 0.5kb upstream 0.5kb upstream 500 false Chr04: 3307316-3307815 Populus trichocarpa
Potri.004G043700 0.5kb downstream 0.5kb downstream 6235 true Chr04: 3307816-3314050 Populus trichocarpa
Potri.004G043700 0.5kb downstream 0.5kb downstream 500 false Chr04: 3313551-3314050 Populus trichocarpa
Potri.004G043700 1.0kb upstream 1.0kb upstream 6735 true Chr04: 3306816-3313550 Populus trichocarpa
Potri.004G043700 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3306816-3307815 Populus trichocarpa
Potri.004G043700 1.0kb downstream 1.0kb downstream 6735 true Chr04: 3307816-3314550 Populus trichocarpa
Potri.004G043700 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3313551-3314550 Populus trichocarpa
Potri.004G043700 2.0kb upstream 2.0kb upstream 7735 true Chr04: 3305816-3313550 Populus trichocarpa
Potri.004G043700 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3305816-3307815 Populus trichocarpa
Potri.004G043700 2.0kb downstream 2.0kb downstream 7735 true Chr04: 3307816-3315550 Populus trichocarpa
Potri.004G043700 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3313551-3315550 Populus trichocarpa
Potri.004G043700 5.0kb upstream 5.0kb upstream 10735 true Chr04: 3302816-3313550 Populus trichocarpa
Potri.004G043700 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3302816-3307815 Populus trichocarpa
Potri.004G043700 5.0kb downstream 5.0kb downstream 10735 true Chr04: 3307816-3318550 Populus trichocarpa
Potri.004G043700 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3313551-3318550 Populus trichocarpa
Potri.004G043700 10.0kb upstream 10.0kb upstream 15735 true Chr04: 3297816-3313550 Populus trichocarpa
Potri.004G043700 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3297816-3307815 Populus trichocarpa
Potri.004G043700 10.0kb downstream 10.0kb downstream 15735 true Chr04: 3307816-3323550 Populus trichocarpa
Potri.004G043700 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3313551-3323550 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122464180 5262 Malpighiales View MSA
124249053 5268 Malvidae View MSA
124060504 5270 Rosid View MSA
123749649 5271 Pentapetalae View MSA
122794973 5272 Eudicot View MSA
122043531 5273 Angiosperm View MSA
121344443 5274 Embryophyte View MSA
123428276 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain