Gene : Potri.004G044400 P. trichocarpa v3.1

Defline:  (1 of 3) PTHR13935:SF46 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  441
Name:  ? Potri.004G044400 Secondary Identifier:  ? PAC:37230760

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G044400 0.5kb upstream 0.5kb upstream 1574 true Chr04: 3371551-3373124 Populus trichocarpa
Potri.004G044400 0.5kb upstream 0.5kb upstream 500 false Chr04: 3371551-3372050 Populus trichocarpa
Potri.004G044400 0.5kb downstream 0.5kb downstream 1574 true Chr04: 3372051-3373624 Populus trichocarpa
Potri.004G044400 0.5kb downstream 0.5kb downstream 500 false Chr04: 3373125-3373624 Populus trichocarpa
Potri.004G044400 1.0kb upstream 1.0kb upstream 2074 true Chr04: 3371051-3373124 Populus trichocarpa
Potri.004G044400 1.0kb upstream 1.0kb upstream 1000 false Chr04: 3371051-3372050 Populus trichocarpa
Potri.004G044400 1.0kb downstream 1.0kb downstream 2074 true Chr04: 3372051-3374124 Populus trichocarpa
Potri.004G044400 1.0kb downstream 1.0kb downstream 1000 false Chr04: 3373125-3374124 Populus trichocarpa
Potri.004G044400 2.0kb upstream 2.0kb upstream 3074 true Chr04: 3370051-3373124 Populus trichocarpa
Potri.004G044400 2.0kb upstream 2.0kb upstream 2000 false Chr04: 3370051-3372050 Populus trichocarpa
Potri.004G044400 2.0kb downstream 2.0kb downstream 3074 true Chr04: 3372051-3375124 Populus trichocarpa
Potri.004G044400 2.0kb downstream 2.0kb downstream 2000 false Chr04: 3373125-3375124 Populus trichocarpa
Potri.004G044400 5.0kb upstream 5.0kb upstream 6074 true Chr04: 3367051-3373124 Populus trichocarpa
Potri.004G044400 5.0kb upstream 5.0kb upstream 5000 false Chr04: 3367051-3372050 Populus trichocarpa
Potri.004G044400 5.0kb downstream 5.0kb downstream 6074 true Chr04: 3372051-3378124 Populus trichocarpa
Potri.004G044400 5.0kb downstream 5.0kb downstream 5000 false Chr04: 3373125-3378124 Populus trichocarpa
Potri.004G044400 10.0kb upstream 10.0kb upstream 11074 true Chr04: 3362051-3373124 Populus trichocarpa
Potri.004G044400 10.0kb upstream 10.0kb upstream 10000 false Chr04: 3362051-3372050 Populus trichocarpa
Potri.004G044400 10.0kb downstream 10.0kb downstream 11074 true Chr04: 3372051-3383124 Populus trichocarpa
Potri.004G044400 10.0kb downstream 10.0kb downstream 10000 false Chr04: 3373125-3383124 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
122414028 5262 Malpighiales View MSA
124207407 5268 Malvidae View MSA
124073436 5270 Rosid View MSA
123745471 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain