Gene : Potri.004G163300 P. trichocarpa v3.1

Defline:  (1 of 1) K01583 - arginine decarboxylase (E4.1.1.19) Genomic Order:  1658
Name:  ? Potri.004G163300 Secondary Identifier:  ? PAC:37231851

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa POLYAMINSYN3-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-43 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G163300 0.5kb upstream 0.5kb upstream 3760 true Chr04: 18414798-18418557 Populus trichocarpa
Potri.004G163300 0.5kb upstream 0.5kb upstream 500 false Chr04: 18418058-18418557 Populus trichocarpa
Potri.004G163300 0.5kb downstream 0.5kb downstream 3760 true Chr04: 18414298-18418057 Populus trichocarpa
Potri.004G163300 0.5kb downstream 0.5kb downstream 500 false Chr04: 18414298-18414797 Populus trichocarpa
Potri.004G163300 1.0kb upstream 1.0kb upstream 4260 true Chr04: 18414798-18419057 Populus trichocarpa
Potri.004G163300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 18418058-18419057 Populus trichocarpa
Potri.004G163300 1.0kb downstream 1.0kb downstream 4260 true Chr04: 18413798-18418057 Populus trichocarpa
Potri.004G163300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 18413798-18414797 Populus trichocarpa
Potri.004G163300 2.0kb upstream 2.0kb upstream 5260 true Chr04: 18414798-18420057 Populus trichocarpa
Potri.004G163300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 18418058-18420057 Populus trichocarpa
Potri.004G163300 2.0kb downstream 2.0kb downstream 5260 true Chr04: 18412798-18418057 Populus trichocarpa
Potri.004G163300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 18412798-18414797 Populus trichocarpa
Potri.004G163300 5.0kb upstream 5.0kb upstream 8260 true Chr04: 18414798-18423057 Populus trichocarpa
Potri.004G163300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 18418058-18423057 Populus trichocarpa
Potri.004G163300 5.0kb downstream 5.0kb downstream 8260 true Chr04: 18409798-18418057 Populus trichocarpa
Potri.004G163300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 18409798-18414797 Populus trichocarpa
Potri.004G163300 10.0kb upstream 10.0kb upstream 13260 true Chr04: 18414798-18428057 Populus trichocarpa
Potri.004G163300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 18418058-18428057 Populus trichocarpa
Potri.004G163300 10.0kb downstream 10.0kb downstream 13260 true Chr04: 18404798-18418057 Populus trichocarpa
Potri.004G163300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 18404798-18414797 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450404 5262 Malpighiales View MSA
124242922 5268 Malvidae View MSA
124064588 5270 Rosid View MSA
123739718 5271 Pentapetalae View MSA
122791004 5272 Eudicot View MSA
122046464 5273 Angiosperm View MSA
121350786 5274 Embryophyte View MSA
123424715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain