Gene : Potri.004G156300 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR31321:SF10 - PECTINESTERASE 11-RELATED Genomic Order:  1586
Name:  ? Potri.004G156300 Secondary Identifier:  ? PAC:37229458

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-1081 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G156300 0.5kb upstream 0.5kb upstream 2416 true Chr04: 17814247-17816662 Populus trichocarpa
Potri.004G156300 0.5kb upstream 0.5kb upstream 500 false Chr04: 17814247-17814746 Populus trichocarpa
Potri.004G156300 0.5kb downstream 0.5kb downstream 2416 true Chr04: 17814747-17817162 Populus trichocarpa
Potri.004G156300 0.5kb downstream 0.5kb downstream 500 false Chr04: 17816663-17817162 Populus trichocarpa
Potri.004G156300 1.0kb upstream 1.0kb upstream 2916 true Chr04: 17813747-17816662 Populus trichocarpa
Potri.004G156300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 17813747-17814746 Populus trichocarpa
Potri.004G156300 1.0kb downstream 1.0kb downstream 2916 true Chr04: 17814747-17817662 Populus trichocarpa
Potri.004G156300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 17816663-17817662 Populus trichocarpa
Potri.004G156300 2.0kb upstream 2.0kb upstream 3916 true Chr04: 17812747-17816662 Populus trichocarpa
Potri.004G156300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 17812747-17814746 Populus trichocarpa
Potri.004G156300 2.0kb downstream 2.0kb downstream 3916 true Chr04: 17814747-17818662 Populus trichocarpa
Potri.004G156300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 17816663-17818662 Populus trichocarpa
Potri.004G156300 5.0kb upstream 5.0kb upstream 6916 true Chr04: 17809747-17816662 Populus trichocarpa
Potri.004G156300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 17809747-17814746 Populus trichocarpa
Potri.004G156300 5.0kb downstream 5.0kb downstream 6916 true Chr04: 17814747-17821662 Populus trichocarpa
Potri.004G156300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 17816663-17821662 Populus trichocarpa
Potri.004G156300 10.0kb upstream 10.0kb upstream 11916 true Chr04: 17804747-17816662 Populus trichocarpa
Potri.004G156300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 17804747-17814746 Populus trichocarpa
Potri.004G156300 10.0kb downstream 10.0kb downstream 11916 true Chr04: 17814747-17826662 Populus trichocarpa
Potri.004G156300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 17816663-17826662 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122425877 5262 Malpighiales View MSA
124241486 5268 Malvidae View MSA
124072507 5270 Rosid View MSA
123749386 5271 Pentapetalae View MSA
122794986 5272 Eudicot View MSA
122041979 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain