Gene : Potri.004G124000 P. trichocarpa v3.1

Defline:  (1 of 2) K09272 - structure-specific recognition protein 1 (SSRP1) Genomic Order:  1262
Name:  ? Potri.004G124000 Secondary Identifier:  ? PAC:37229352

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G124000 0.5kb upstream 0.5kb upstream 5831 true Chr04: 11977913-11983743 Populus trichocarpa
Potri.004G124000 0.5kb upstream 0.5kb upstream 500 false Chr04: 11977913-11978412 Populus trichocarpa
Potri.004G124000 0.5kb downstream 0.5kb downstream 5831 true Chr04: 11978413-11984243 Populus trichocarpa
Potri.004G124000 0.5kb downstream 0.5kb downstream 500 false Chr04: 11983744-11984243 Populus trichocarpa
Potri.004G124000 1.0kb upstream 1.0kb upstream 6331 true Chr04: 11977413-11983743 Populus trichocarpa
Potri.004G124000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 11977413-11978412 Populus trichocarpa
Potri.004G124000 1.0kb downstream 1.0kb downstream 6331 true Chr04: 11978413-11984743 Populus trichocarpa
Potri.004G124000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 11983744-11984743 Populus trichocarpa
Potri.004G124000 2.0kb upstream 2.0kb upstream 7331 true Chr04: 11976413-11983743 Populus trichocarpa
Potri.004G124000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 11976413-11978412 Populus trichocarpa
Potri.004G124000 2.0kb downstream 2.0kb downstream 7331 true Chr04: 11978413-11985743 Populus trichocarpa
Potri.004G124000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 11983744-11985743 Populus trichocarpa
Potri.004G124000 5.0kb upstream 5.0kb upstream 10331 true Chr04: 11973413-11983743 Populus trichocarpa
Potri.004G124000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 11973413-11978412 Populus trichocarpa
Potri.004G124000 5.0kb downstream 5.0kb downstream 10331 true Chr04: 11978413-11988743 Populus trichocarpa
Potri.004G124000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 11983744-11988743 Populus trichocarpa
Potri.004G124000 10.0kb upstream 10.0kb upstream 15331 true Chr04: 11968413-11983743 Populus trichocarpa
Potri.004G124000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 11968413-11978412 Populus trichocarpa
Potri.004G124000 10.0kb downstream 10.0kb downstream 15331 true Chr04: 11978413-11993743 Populus trichocarpa
Potri.004G124000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 11983744-11993743 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452703 5262 Malpighiales View MSA
124242721 5268 Malvidae View MSA
124060640 5270 Rosid View MSA
123744635 5271 Pentapetalae View MSA
122790158 5272 Eudicot View MSA
122041570 5273 Angiosperm View MSA
121347609 5274 Embryophyte View MSA
123424150 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain