Gene : Potri.004G102500 P. trichocarpa v3.1
Defline:  (1 of 3) 5.3.99.6 - Allene-oxide cyclase Genomic Order:  1043
Name:  ? Potri.004G102500 Secondary Identifier:  ? PAC:37231910
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-735 Populus trichocarpa pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G102500 0.5kb upstream 0.5kb upstream 2515 true Chr04: 9005936-9008450 Populus trichocarpa
Potri.004G102500 0.5kb upstream 0.5kb upstream 500 false Chr04: 9007951-9008450 Populus trichocarpa
Potri.004G102500 0.5kb downstream 0.5kb downstream 2515 true Chr04: 9005436-9007950 Populus trichocarpa
Potri.004G102500 0.5kb downstream 0.5kb downstream 500 false Chr04: 9005436-9005935 Populus trichocarpa
Potri.004G102500 1.0kb upstream 1.0kb upstream 3015 true Chr04: 9005936-9008950 Populus trichocarpa
Potri.004G102500 1.0kb upstream 1.0kb upstream 1000 false Chr04: 9007951-9008950 Populus trichocarpa
Potri.004G102500 1.0kb downstream 1.0kb downstream 3015 true Chr04: 9004936-9007950 Populus trichocarpa
Potri.004G102500 1.0kb downstream 1.0kb downstream 1000 false Chr04: 9004936-9005935 Populus trichocarpa
Potri.004G102500 2.0kb upstream 2.0kb upstream 4015 true Chr04: 9005936-9009950 Populus trichocarpa
Potri.004G102500 2.0kb upstream 2.0kb upstream 2000 false Chr04: 9007951-9009950 Populus trichocarpa
Potri.004G102500 2.0kb downstream 2.0kb downstream 4015 true Chr04: 9003936-9007950 Populus trichocarpa
Potri.004G102500 2.0kb downstream 2.0kb downstream 2000 false Chr04: 9003936-9005935 Populus trichocarpa
Potri.004G102500 5.0kb upstream 5.0kb upstream 7015 true Chr04: 9005936-9012950 Populus trichocarpa
Potri.004G102500 5.0kb upstream 5.0kb upstream 5000 false Chr04: 9007951-9012950 Populus trichocarpa
Potri.004G102500 5.0kb downstream 5.0kb downstream 7015 true Chr04: 9000936-9007950 Populus trichocarpa
Potri.004G102500 5.0kb downstream 5.0kb downstream 5000 false Chr04: 9000936-9005935 Populus trichocarpa
Potri.004G102500 10.0kb upstream 10.0kb upstream 12015 true Chr04: 9005936-9017950 Populus trichocarpa
Potri.004G102500 10.0kb upstream 10.0kb upstream 10000 false Chr04: 9007951-9017950 Populus trichocarpa
Potri.004G102500 10.0kb downstream 10.0kb downstream 12015 true Chr04: 8995936-9007950 Populus trichocarpa
Potri.004G102500 10.0kb downstream 10.0kb downstream 10000 false Chr04: 8995936-9005935 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122454646 5262 Malpighiales View MSA
124252758 5268 Malvidae View MSA
124066771 5270 Rosid View MSA
123739753 5271 Pentapetalae View MSA
122789032 5272 Eudicot View MSA
122045897 5273 Angiosperm View MSA
121350459 5274 Embryophyte View MSA
123426138 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain