Gene : Potri.004G208800 P. trichocarpa v3.1
Defline:  (1 of 4) PTHR13301:SF40 - CELLULOSE SYNTHASE-LIKE PROTEIN D4 Genomic Order:  2134
Name:  ? Potri.004G208800 Secondary Identifier:  ? PAC:37229939
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5800 Populus trichocarpa pathologic  

Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G208800 0.5kb upstream 0.5kb upstream 4932 true Chr04: 21704097-21709028 Populus trichocarpa
Potri.004G208800 0.5kb upstream 0.5kb upstream 500 false Chr04: 21704097-21704596 Populus trichocarpa
Potri.004G208800 0.5kb downstream 0.5kb downstream 4932 true Chr04: 21704597-21709528 Populus trichocarpa
Potri.004G208800 0.5kb downstream 0.5kb downstream 500 false Chr04: 21709029-21709528 Populus trichocarpa
Potri.004G208800 1.0kb upstream 1.0kb upstream 5432 true Chr04: 21703597-21709028 Populus trichocarpa
Potri.004G208800 1.0kb upstream 1.0kb upstream 1000 false Chr04: 21703597-21704596 Populus trichocarpa
Potri.004G208800 1.0kb downstream 1.0kb downstream 5432 true Chr04: 21704597-21710028 Populus trichocarpa
Potri.004G208800 1.0kb downstream 1.0kb downstream 1000 false Chr04: 21709029-21710028 Populus trichocarpa
Potri.004G208800 2.0kb upstream 2.0kb upstream 6432 true Chr04: 21702597-21709028 Populus trichocarpa
Potri.004G208800 2.0kb upstream 2.0kb upstream 2000 false Chr04: 21702597-21704596 Populus trichocarpa
Potri.004G208800 2.0kb downstream 2.0kb downstream 6432 true Chr04: 21704597-21711028 Populus trichocarpa
Potri.004G208800 2.0kb downstream 2.0kb downstream 2000 false Chr04: 21709029-21711028 Populus trichocarpa
Potri.004G208800 5.0kb upstream 5.0kb upstream 9432 true Chr04: 21699597-21709028 Populus trichocarpa
Potri.004G208800 5.0kb upstream 5.0kb upstream 5000 false Chr04: 21699597-21704596 Populus trichocarpa
Potri.004G208800 5.0kb downstream 5.0kb downstream 9432 true Chr04: 21704597-21714028 Populus trichocarpa
Potri.004G208800 5.0kb downstream 5.0kb downstream 5000 false Chr04: 21709029-21714028 Populus trichocarpa
Potri.004G208800 10.0kb upstream 10.0kb upstream 14432 true Chr04: 21694597-21709028 Populus trichocarpa
Potri.004G208800 10.0kb upstream 10.0kb upstream 10000 false Chr04: 21694597-21704596 Populus trichocarpa
Potri.004G208800 10.0kb downstream 10.0kb downstream 14432 true Chr04: 21704597-21719028 Populus trichocarpa
Potri.004G208800 10.0kb downstream 10.0kb downstream 10000 false Chr04: 21709029-21719028 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122455007 5262 Malpighiales View MSA
124251883 5268 Malvidae View MSA
124066542 5270 Rosid View MSA
123736520 5271 Pentapetalae View MSA
122787615 5272 Eudicot View MSA
122046056 5273 Angiosperm View MSA
121310544 5274 Embryophyte View MSA
123348000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain