Gene : Potri.004G179000 P. trichocarpa v3.1

Defline:  (1 of 1) K06640 - serine/threonine-protein kinase ATR (ATR) Genomic Order:  1823
Name:  ? Potri.004G179000 Secondary Identifier:  ? PAC:37229057

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G179000 0.5kb upstream 0.5kb upstream 13462 true Chr04: 19632354-19645815 Populus trichocarpa
Potri.004G179000 0.5kb upstream 0.5kb upstream 500 false Chr04: 19632354-19632853 Populus trichocarpa
Potri.004G179000 0.5kb downstream 0.5kb downstream 13462 true Chr04: 19632854-19646315 Populus trichocarpa
Potri.004G179000 0.5kb downstream 0.5kb downstream 500 false Chr04: 19645816-19646315 Populus trichocarpa
Potri.004G179000 1.0kb upstream 1.0kb upstream 13962 true Chr04: 19631854-19645815 Populus trichocarpa
Potri.004G179000 1.0kb upstream 1.0kb upstream 1000 false Chr04: 19631854-19632853 Populus trichocarpa
Potri.004G179000 1.0kb downstream 1.0kb downstream 13962 true Chr04: 19632854-19646815 Populus trichocarpa
Potri.004G179000 1.0kb downstream 1.0kb downstream 1000 false Chr04: 19645816-19646815 Populus trichocarpa
Potri.004G179000 2.0kb upstream 2.0kb upstream 14962 true Chr04: 19630854-19645815 Populus trichocarpa
Potri.004G179000 2.0kb upstream 2.0kb upstream 2000 false Chr04: 19630854-19632853 Populus trichocarpa
Potri.004G179000 2.0kb downstream 2.0kb downstream 14962 true Chr04: 19632854-19647815 Populus trichocarpa
Potri.004G179000 2.0kb downstream 2.0kb downstream 2000 false Chr04: 19645816-19647815 Populus trichocarpa
Potri.004G179000 5.0kb upstream 5.0kb upstream 17962 true Chr04: 19627854-19645815 Populus trichocarpa
Potri.004G179000 5.0kb upstream 5.0kb upstream 5000 false Chr04: 19627854-19632853 Populus trichocarpa
Potri.004G179000 5.0kb downstream 5.0kb downstream 17962 true Chr04: 19632854-19650815 Populus trichocarpa
Potri.004G179000 5.0kb downstream 5.0kb downstream 5000 false Chr04: 19645816-19650815 Populus trichocarpa
Potri.004G179000 10.0kb upstream 10.0kb upstream 22962 true Chr04: 19622854-19645815 Populus trichocarpa
Potri.004G179000 10.0kb upstream 10.0kb upstream 10000 false Chr04: 19622854-19632853 Populus trichocarpa
Potri.004G179000 10.0kb downstream 10.0kb downstream 22962 true Chr04: 19632854-19655815 Populus trichocarpa
Potri.004G179000 10.0kb downstream 10.0kb downstream 10000 false Chr04: 19645816-19655815 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452240 5262 Malpighiales View MSA
124241595 5268 Malvidae View MSA
124068792 5270 Rosid View MSA
123737663 5271 Pentapetalae View MSA
122786169 5272 Eudicot View MSA
122044590 5273 Angiosperm View MSA
121345058 5274 Embryophyte View MSA
123426906 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain