Gene : Potri.005G048200 P. trichocarpa v3.1
Defline:  (1 of 6) PTHR10314:SF97 - BIFUNCTIONAL L-3-CYANOALANINE SYNTHASE/CYSTEINE SYNTHASE D1-RELATED Genomic Order:  509
Name:  ? Potri.005G048200 Secondary Identifier:  ? PAC:37265933
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa CYSTSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-6936 Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G048200 0.5kb upstream 0.5kb upstream 4222 true Chr05: 3494904-3499125 Populus trichocarpa
Potri.005G048200 0.5kb upstream 0.5kb upstream 500 false Chr05: 3498626-3499125 Populus trichocarpa
Potri.005G048200 0.5kb downstream 0.5kb downstream 4222 true Chr05: 3494404-3498625 Populus trichocarpa
Potri.005G048200 0.5kb downstream 0.5kb downstream 500 false Chr05: 3494404-3494903 Populus trichocarpa
Potri.005G048200 1.0kb upstream 1.0kb upstream 4722 true Chr05: 3494904-3499625 Populus trichocarpa
Potri.005G048200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3498626-3499625 Populus trichocarpa
Potri.005G048200 1.0kb downstream 1.0kb downstream 4722 true Chr05: 3493904-3498625 Populus trichocarpa
Potri.005G048200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3493904-3494903 Populus trichocarpa
Potri.005G048200 2.0kb upstream 2.0kb upstream 5722 true Chr05: 3494904-3500625 Populus trichocarpa
Potri.005G048200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3498626-3500625 Populus trichocarpa
Potri.005G048200 2.0kb downstream 2.0kb downstream 5722 true Chr05: 3492904-3498625 Populus trichocarpa
Potri.005G048200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3492904-3494903 Populus trichocarpa
Potri.005G048200 5.0kb upstream 5.0kb upstream 8722 true Chr05: 3494904-3503625 Populus trichocarpa
Potri.005G048200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3498626-3503625 Populus trichocarpa
Potri.005G048200 5.0kb downstream 5.0kb downstream 8722 true Chr05: 3489904-3498625 Populus trichocarpa
Potri.005G048200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3489904-3494903 Populus trichocarpa
Potri.005G048200 10.0kb upstream 10.0kb upstream 13722 true Chr05: 3494904-3508625 Populus trichocarpa
Potri.005G048200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3498626-3508625 Populus trichocarpa
Potri.005G048200 10.0kb downstream 10.0kb downstream 13722 true Chr05: 3484904-3498625 Populus trichocarpa
Potri.005G048200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3484904-3494903 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458217 5262 Malpighiales View MSA
124251516 5268 Malvidae View MSA
124069374 5270 Rosid View MSA
123750353 5271 Pentapetalae View MSA
122787082 5272 Eudicot View MSA
122044204 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain