Gene : Potri.005G050200 P. trichocarpa v3.1
Defline:  (1 of 541) PF13041 - PPR repeat family (PPR_2) Genomic Order:  533
Name:  ? Potri.005G050200 Secondary Identifier:  ? PAC:37263988
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G050200 0.5kb upstream 0.5kb upstream 2183 true Chr05: 3616400-3618582 Populus trichocarpa
Potri.005G050200 0.5kb upstream 0.5kb upstream 500 false Chr05: 3618083-3618582 Populus trichocarpa
Potri.005G050200 0.5kb downstream 0.5kb downstream 2183 true Chr05: 3615900-3618082 Populus trichocarpa
Potri.005G050200 0.5kb downstream 0.5kb downstream 500 false Chr05: 3615900-3616399 Populus trichocarpa
Potri.005G050200 1.0kb upstream 1.0kb upstream 2683 true Chr05: 3616400-3619082 Populus trichocarpa
Potri.005G050200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3618083-3619082 Populus trichocarpa
Potri.005G050200 1.0kb downstream 1.0kb downstream 2683 true Chr05: 3615400-3618082 Populus trichocarpa
Potri.005G050200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3615400-3616399 Populus trichocarpa
Potri.005G050200 2.0kb upstream 2.0kb upstream 3683 true Chr05: 3616400-3620082 Populus trichocarpa
Potri.005G050200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3618083-3620082 Populus trichocarpa
Potri.005G050200 2.0kb downstream 2.0kb downstream 3683 true Chr05: 3614400-3618082 Populus trichocarpa
Potri.005G050200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3614400-3616399 Populus trichocarpa
Potri.005G050200 5.0kb upstream 5.0kb upstream 6683 true Chr05: 3616400-3623082 Populus trichocarpa
Potri.005G050200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3618083-3623082 Populus trichocarpa
Potri.005G050200 5.0kb downstream 5.0kb downstream 6683 true Chr05: 3611400-3618082 Populus trichocarpa
Potri.005G050200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3611400-3616399 Populus trichocarpa
Potri.005G050200 10.0kb upstream 10.0kb upstream 11683 true Chr05: 3616400-3628082 Populus trichocarpa
Potri.005G050200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3618083-3628082 Populus trichocarpa
Potri.005G050200 10.0kb downstream 10.0kb downstream 11683 true Chr05: 3606400-3618082 Populus trichocarpa
Potri.005G050200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3606400-3616399 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457068 5262 Malpighiales View MSA
124244790 5268 Malvidae View MSA
124069371 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain