Gene : Potri.005G042100 P. trichocarpa v3.1
Defline:  (1 of 3) PTHR12899:SF9 - EXPRESSED PROTEIN Genomic Order:  441
Name:  ? Potri.005G042100 Secondary Identifier:  ? PAC:37263412
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G042100 0.5kb upstream 0.5kb upstream 1934 true Chr05: 3095761-3097694 Populus trichocarpa
Potri.005G042100 0.5kb upstream 0.5kb upstream 500 false Chr05: 3097195-3097694 Populus trichocarpa
Potri.005G042100 0.5kb downstream 0.5kb downstream 1934 true Chr05: 3095261-3097194 Populus trichocarpa
Potri.005G042100 0.5kb downstream 0.5kb downstream 500 false Chr05: 3095261-3095760 Populus trichocarpa
Potri.005G042100 1.0kb upstream 1.0kb upstream 2434 true Chr05: 3095761-3098194 Populus trichocarpa
Potri.005G042100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3097195-3098194 Populus trichocarpa
Potri.005G042100 1.0kb downstream 1.0kb downstream 2434 true Chr05: 3094761-3097194 Populus trichocarpa
Potri.005G042100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3094761-3095760 Populus trichocarpa
Potri.005G042100 2.0kb upstream 2.0kb upstream 3434 true Chr05: 3095761-3099194 Populus trichocarpa
Potri.005G042100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3097195-3099194 Populus trichocarpa
Potri.005G042100 2.0kb downstream 2.0kb downstream 3434 true Chr05: 3093761-3097194 Populus trichocarpa
Potri.005G042100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3093761-3095760 Populus trichocarpa
Potri.005G042100 5.0kb upstream 5.0kb upstream 6434 true Chr05: 3095761-3102194 Populus trichocarpa
Potri.005G042100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3097195-3102194 Populus trichocarpa
Potri.005G042100 5.0kb downstream 5.0kb downstream 6434 true Chr05: 3090761-3097194 Populus trichocarpa
Potri.005G042100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3090761-3095760 Populus trichocarpa
Potri.005G042100 10.0kb upstream 10.0kb upstream 11434 true Chr05: 3095761-3107194 Populus trichocarpa
Potri.005G042100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3097195-3107194 Populus trichocarpa
Potri.005G042100 10.0kb downstream 10.0kb downstream 11434 true Chr05: 3085761-3097194 Populus trichocarpa
Potri.005G042100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3085761-3095760 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122455560 5262 Malpighiales View MSA
124238993 5268 Malvidae View MSA
124063027 5270 Rosid View MSA
123744387 5271 Pentapetalae View MSA
122788355 5272 Eudicot View MSA
122047146 5273 Angiosperm View MSA
121310695 5274 Embryophyte View MSA
123348119 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain