Gene : Potri.005G014300 P. trichocarpa v3.1

Defline:  (1 of 5) K05953 - nicotianamine synthase (E2.5.1.43) Genomic Order:  148
Name:  ? Potri.005G014300 Secondary Identifier:  ? PAC:37262869

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5957 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G014300 0.5kb upstream 0.5kb upstream 1725 true Chr05: 1109655-1111379 Populus trichocarpa
Potri.005G014300 0.5kb upstream 0.5kb upstream 500 false Chr05: 1110880-1111379 Populus trichocarpa
Potri.005G014300 0.5kb downstream 0.5kb downstream 1725 true Chr05: 1109155-1110879 Populus trichocarpa
Potri.005G014300 0.5kb downstream 0.5kb downstream 500 false Chr05: 1109155-1109654 Populus trichocarpa
Potri.005G014300 1.0kb upstream 1.0kb upstream 2225 true Chr05: 1109655-1111879 Populus trichocarpa
Potri.005G014300 1.0kb upstream 1.0kb upstream 1000 false Chr05: 1110880-1111879 Populus trichocarpa
Potri.005G014300 1.0kb downstream 1.0kb downstream 2225 true Chr05: 1108655-1110879 Populus trichocarpa
Potri.005G014300 1.0kb downstream 1.0kb downstream 1000 false Chr05: 1108655-1109654 Populus trichocarpa
Potri.005G014300 2.0kb upstream 2.0kb upstream 3225 true Chr05: 1109655-1112879 Populus trichocarpa
Potri.005G014300 2.0kb upstream 2.0kb upstream 2000 false Chr05: 1110880-1112879 Populus trichocarpa
Potri.005G014300 2.0kb downstream 2.0kb downstream 3225 true Chr05: 1107655-1110879 Populus trichocarpa
Potri.005G014300 2.0kb downstream 2.0kb downstream 2000 false Chr05: 1107655-1109654 Populus trichocarpa
Potri.005G014300 5.0kb upstream 5.0kb upstream 6225 true Chr05: 1109655-1115879 Populus trichocarpa
Potri.005G014300 5.0kb upstream 5.0kb upstream 5000 false Chr05: 1110880-1115879 Populus trichocarpa
Potri.005G014300 5.0kb downstream 5.0kb downstream 6225 true Chr05: 1104655-1110879 Populus trichocarpa
Potri.005G014300 5.0kb downstream 5.0kb downstream 5000 false Chr05: 1104655-1109654 Populus trichocarpa
Potri.005G014300 10.0kb upstream 10.0kb upstream 11225 true Chr05: 1109655-1120879 Populus trichocarpa
Potri.005G014300 10.0kb upstream 10.0kb upstream 10000 false Chr05: 1110880-1120879 Populus trichocarpa
Potri.005G014300 10.0kb downstream 10.0kb downstream 11225 true Chr05: 1099655-1110879 Populus trichocarpa
Potri.005G014300 10.0kb downstream 10.0kb downstream 10000 false Chr05: 1099655-1109654 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451611 5262 Malpighiales View MSA
124238052 5268 Malvidae View MSA
124066045 5270 Rosid View MSA
123750791 5271 Pentapetalae View MSA
122792107 5272 Eudicot View MSA
122044478 5273 Angiosperm View MSA
121350055 5274 Embryophyte View MSA
123381558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain