Gene : Potri.004G233300 P. trichocarpa v3.1
Defline:  (1 of 1) 2.7.1.138 - Ceramide kinase / Acylsphingosine kinase Genomic Order:  2395
Name:  ? Potri.004G233300 Secondary Identifier:  ? PAC:37231634
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5129 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G233300 0.5kb upstream 0.5kb upstream 6634 true Chr04: 23963792-23970425 Populus trichocarpa
Potri.004G233300 0.5kb upstream 0.5kb upstream 500 false Chr04: 23969926-23970425 Populus trichocarpa
Potri.004G233300 0.5kb downstream 0.5kb downstream 6634 true Chr04: 23963292-23969925 Populus trichocarpa
Potri.004G233300 0.5kb downstream 0.5kb downstream 500 false Chr04: 23963292-23963791 Populus trichocarpa
Potri.004G233300 1.0kb upstream 1.0kb upstream 7134 true Chr04: 23963792-23970925 Populus trichocarpa
Potri.004G233300 1.0kb upstream 1.0kb upstream 1000 false Chr04: 23969926-23970925 Populus trichocarpa
Potri.004G233300 1.0kb downstream 1.0kb downstream 7134 true Chr04: 23962792-23969925 Populus trichocarpa
Potri.004G233300 1.0kb downstream 1.0kb downstream 1000 false Chr04: 23962792-23963791 Populus trichocarpa
Potri.004G233300 2.0kb upstream 2.0kb upstream 8134 true Chr04: 23963792-23971925 Populus trichocarpa
Potri.004G233300 2.0kb upstream 2.0kb upstream 2000 false Chr04: 23969926-23971925 Populus trichocarpa
Potri.004G233300 2.0kb downstream 2.0kb downstream 8134 true Chr04: 23961792-23969925 Populus trichocarpa
Potri.004G233300 2.0kb downstream 2.0kb downstream 2000 false Chr04: 23961792-23963791 Populus trichocarpa
Potri.004G233300 5.0kb upstream 5.0kb upstream 11134 true Chr04: 23963792-23974925 Populus trichocarpa
Potri.004G233300 5.0kb upstream 5.0kb upstream 5000 false Chr04: 23969926-23974925 Populus trichocarpa
Potri.004G233300 5.0kb downstream 5.0kb downstream 11134 true Chr04: 23958792-23969925 Populus trichocarpa
Potri.004G233300 5.0kb downstream 5.0kb downstream 5000 false Chr04: 23958792-23963791 Populus trichocarpa
Potri.004G233300 10.0kb upstream 10.0kb upstream 16134 true Chr04: 23963792-23979925 Populus trichocarpa
Potri.004G233300 10.0kb upstream 10.0kb upstream 10000 false Chr04: 23969926-23979925 Populus trichocarpa
Potri.004G233300 10.0kb downstream 10.0kb downstream 16134 true Chr04: 23953792-23969925 Populus trichocarpa
Potri.004G233300 10.0kb downstream 10.0kb downstream 10000 false Chr04: 23953792-23963791 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122451729 5262 Malpighiales View MSA
124251685 5268 Malvidae View MSA
124066629 5270 Rosid View MSA
123746434 5271 Pentapetalae View MSA
122791324 5272 Eudicot View MSA
122045057 5273 Angiosperm View MSA
121345163 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain