Gene : Potri.004G236900 P. trichocarpa v3.1

Defline:  (1 of 1) PTHR11782:SF3 - APYRASE 7-RELATED Genomic Order:  2432
Name:  ? Potri.004G236900 Secondary Identifier:  ? PAC:37230048

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-6545 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7177 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7184 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7185 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7210 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7211 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.004G236900 0.5kb upstream 0.5kb upstream 6473 true Chr04: 24246559-24253031 Populus trichocarpa
Potri.004G236900 0.5kb upstream 0.5kb upstream 500 false Chr04: 24252532-24253031 Populus trichocarpa
Potri.004G236900 0.5kb downstream 0.5kb downstream 6473 true Chr04: 24246059-24252531 Populus trichocarpa
Potri.004G236900 0.5kb downstream 0.5kb downstream 500 false Chr04: 24246059-24246558 Populus trichocarpa
Potri.004G236900 1.0kb upstream 1.0kb upstream 6973 true Chr04: 24246559-24253531 Populus trichocarpa
Potri.004G236900 1.0kb upstream 1.0kb upstream 1000 false Chr04: 24252532-24253531 Populus trichocarpa
Potri.004G236900 1.0kb downstream 1.0kb downstream 6973 true Chr04: 24245559-24252531 Populus trichocarpa
Potri.004G236900 1.0kb downstream 1.0kb downstream 1000 false Chr04: 24245559-24246558 Populus trichocarpa
Potri.004G236900 2.0kb upstream 2.0kb upstream 7973 true Chr04: 24246559-24254531 Populus trichocarpa
Potri.004G236900 2.0kb upstream 2.0kb upstream 2000 false Chr04: 24252532-24254531 Populus trichocarpa
Potri.004G236900 2.0kb downstream 2.0kb downstream 7973 true Chr04: 24244559-24252531 Populus trichocarpa
Potri.004G236900 2.0kb downstream 2.0kb downstream 2000 false Chr04: 24244559-24246558 Populus trichocarpa
Potri.004G236900 5.0kb upstream 5.0kb upstream 10973 true Chr04: 24246559-24257531 Populus trichocarpa
Potri.004G236900 5.0kb upstream 5.0kb upstream 5000 false Chr04: 24252532-24257531 Populus trichocarpa
Potri.004G236900 5.0kb downstream 5.0kb downstream 10973 true Chr04: 24241559-24252531 Populus trichocarpa
Potri.004G236900 5.0kb downstream 5.0kb downstream 5000 false Chr04: 24241559-24246558 Populus trichocarpa
Potri.004G236900 10.0kb upstream 10.0kb upstream 15973 true Chr04: 24246559-24262531 Populus trichocarpa
Potri.004G236900 10.0kb upstream 10.0kb upstream 10000 false Chr04: 24252532-24262531 Populus trichocarpa
Potri.004G236900 10.0kb downstream 10.0kb downstream 15973 true Chr04: 24236559-24252531 Populus trichocarpa
Potri.004G236900 10.0kb downstream 10.0kb downstream 10000 false Chr04: 24236559-24246558 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453604 5262 Malpighiales View MSA
124238552 5268 Malvidae View MSA
124066338 5270 Rosid View MSA
123737585 5271 Pentapetalae View MSA
122786265 5272 Eudicot View MSA
122042120 5273 Angiosperm View MSA
121349143 5274 Embryophyte View MSA
123426899 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain