Gene : Potri.005G100800 P. trichocarpa v3.1
Defline:  (1 of 2) 2.5.1.20 - Rubber cis-polyprenylcistransferase / Rubber transferase Genomic Order:  1063
Name:  ? Potri.005G100800 Secondary Identifier:  ? PAC:37266233
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5815 Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G100800 0.5kb upstream 0.5kb upstream 4165 true Chr05: 7704488-7708652 Populus trichocarpa
Potri.005G100800 0.5kb upstream 0.5kb upstream 500 false Chr05: 7708153-7708652 Populus trichocarpa
Potri.005G100800 0.5kb downstream 0.5kb downstream 4165 true Chr05: 7703988-7708152 Populus trichocarpa
Potri.005G100800 0.5kb downstream 0.5kb downstream 500 false Chr05: 7703988-7704487 Populus trichocarpa
Potri.005G100800 1.0kb upstream 1.0kb upstream 4665 true Chr05: 7704488-7709152 Populus trichocarpa
Potri.005G100800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7708153-7709152 Populus trichocarpa
Potri.005G100800 1.0kb downstream 1.0kb downstream 4665 true Chr05: 7703488-7708152 Populus trichocarpa
Potri.005G100800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7703488-7704487 Populus trichocarpa
Potri.005G100800 2.0kb upstream 2.0kb upstream 5665 true Chr05: 7704488-7710152 Populus trichocarpa
Potri.005G100800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7708153-7710152 Populus trichocarpa
Potri.005G100800 2.0kb downstream 2.0kb downstream 5665 true Chr05: 7702488-7708152 Populus trichocarpa
Potri.005G100800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7702488-7704487 Populus trichocarpa
Potri.005G100800 5.0kb upstream 5.0kb upstream 8665 true Chr05: 7704488-7713152 Populus trichocarpa
Potri.005G100800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7708153-7713152 Populus trichocarpa
Potri.005G100800 5.0kb downstream 5.0kb downstream 8665 true Chr05: 7699488-7708152 Populus trichocarpa
Potri.005G100800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7699488-7704487 Populus trichocarpa
Potri.005G100800 10.0kb upstream 10.0kb upstream 13665 true Chr05: 7704488-7718152 Populus trichocarpa
Potri.005G100800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 7708153-7718152 Populus trichocarpa
Potri.005G100800 10.0kb downstream 10.0kb downstream 13665 true Chr05: 7694488-7708152 Populus trichocarpa
Potri.005G100800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7694488-7704487 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122461346 5262 Malpighiales View MSA
124244449 5268 Malvidae View MSA
124070400 5270 Rosid View MSA
123753715 5271 Pentapetalae View MSA
122795896 5272 Eudicot View MSA
122049873 5273 Angiosperm View MSA
121349663 5274 Embryophyte View MSA
123426106 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain