Gene : Potri.005G099700 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR23416//PTHR23416:SF63 - SIALIC ACID SYNTHASE-RELATED // SERINE ACETYLTRANSFERASE 2-RELATED Genomic Order:  1051
Name:  ? Potri.005G099700 Secondary Identifier:  ? PAC:37264949

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa CYSTSYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-6936 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G099700 0.5kb upstream 0.5kb upstream 5065 true Chr05: 7611931-7616995 Populus trichocarpa
Potri.005G099700 0.5kb upstream 0.5kb upstream 500 false Chr05: 7611931-7612430 Populus trichocarpa
Potri.005G099700 0.5kb downstream 0.5kb downstream 5065 true Chr05: 7612431-7617495 Populus trichocarpa
Potri.005G099700 0.5kb downstream 0.5kb downstream 500 false Chr05: 7616996-7617495 Populus trichocarpa
Potri.005G099700 1.0kb upstream 1.0kb upstream 5565 true Chr05: 7611431-7616995 Populus trichocarpa
Potri.005G099700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 7611431-7612430 Populus trichocarpa
Potri.005G099700 1.0kb downstream 1.0kb downstream 5565 true Chr05: 7612431-7617995 Populus trichocarpa
Potri.005G099700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 7616996-7617995 Populus trichocarpa
Potri.005G099700 2.0kb upstream 2.0kb upstream 6565 true Chr05: 7610431-7616995 Populus trichocarpa
Potri.005G099700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 7610431-7612430 Populus trichocarpa
Potri.005G099700 2.0kb downstream 2.0kb downstream 6565 true Chr05: 7612431-7618995 Populus trichocarpa
Potri.005G099700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 7616996-7618995 Populus trichocarpa
Potri.005G099700 5.0kb upstream 5.0kb upstream 9565 true Chr05: 7607431-7616995 Populus trichocarpa
Potri.005G099700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 7607431-7612430 Populus trichocarpa
Potri.005G099700 5.0kb downstream 5.0kb downstream 9565 true Chr05: 7612431-7621995 Populus trichocarpa
Potri.005G099700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 7616996-7621995 Populus trichocarpa
Potri.005G099700 10.0kb upstream 10.0kb upstream 14565 true Chr05: 7602431-7616995 Populus trichocarpa
Potri.005G099700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 7602431-7612430 Populus trichocarpa
Potri.005G099700 10.0kb downstream 10.0kb downstream 14565 true Chr05: 7612431-7626995 Populus trichocarpa
Potri.005G099700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 7616996-7626995 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452286 5262 Malpighiales View MSA
124240190 5268 Malvidae View MSA
124063279 5270 Rosid View MSA
123743402 5271 Pentapetalae View MSA
122788102 5272 Eudicot View MSA
122045908 5273 Angiosperm View MSA
121349787 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain