Gene : Potri.005G092800 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR20932:SF8 - PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN Genomic Order:  977
Name:  ? Potri.005G092800 Secondary Identifier:  ? PAC:37266325
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G092800 0.5kb upstream 0.5kb upstream 4817 true Chr05: 6920335-6925151 Populus trichocarpa
Potri.005G092800 0.5kb upstream 0.5kb upstream 500 false Chr05: 6924652-6925151 Populus trichocarpa
Potri.005G092800 0.5kb downstream 0.5kb downstream 4817 true Chr05: 6919835-6924651 Populus trichocarpa
Potri.005G092800 0.5kb downstream 0.5kb downstream 500 false Chr05: 6919835-6920334 Populus trichocarpa
Potri.005G092800 1.0kb upstream 1.0kb upstream 5317 true Chr05: 6920335-6925651 Populus trichocarpa
Potri.005G092800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 6924652-6925651 Populus trichocarpa
Potri.005G092800 1.0kb downstream 1.0kb downstream 5317 true Chr05: 6919335-6924651 Populus trichocarpa
Potri.005G092800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 6919335-6920334 Populus trichocarpa
Potri.005G092800 2.0kb upstream 2.0kb upstream 6317 true Chr05: 6920335-6926651 Populus trichocarpa
Potri.005G092800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 6924652-6926651 Populus trichocarpa
Potri.005G092800 2.0kb downstream 2.0kb downstream 6317 true Chr05: 6918335-6924651 Populus trichocarpa
Potri.005G092800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 6918335-6920334 Populus trichocarpa
Potri.005G092800 5.0kb upstream 5.0kb upstream 9317 true Chr05: 6920335-6929651 Populus trichocarpa
Potri.005G092800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 6924652-6929651 Populus trichocarpa
Potri.005G092800 5.0kb downstream 5.0kb downstream 9317 true Chr05: 6915335-6924651 Populus trichocarpa
Potri.005G092800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 6915335-6920334 Populus trichocarpa
Potri.005G092800 10.0kb upstream 10.0kb upstream 14317 true Chr05: 6920335-6934651 Populus trichocarpa
Potri.005G092800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 6924652-6934651 Populus trichocarpa
Potri.005G092800 10.0kb downstream 10.0kb downstream 14317 true Chr05: 6910335-6924651 Populus trichocarpa
Potri.005G092800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 6910335-6920334 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040928 5273 Angiosperm View MSA
122459572 5262 Malpighiales View MSA
124254251 5268 Malvidae View MSA
124070010 5270 Rosid View MSA
123744886 5271 Pentapetalae View MSA
122793061 5272 Eudicot View MSA
121350889 5274 Embryophyte View MSA
123426344 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain