Gene : Potri.005G087850 P. trichocarpa v3.1
Defline:  (1 of 3) K01873 - valyl-tRNA synthetase (VARS, valS) Genomic Order:  928
Name:  ? Potri.005G087850 Secondary Identifier:  ? PAC:37263847
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa TRNA-CHARGING-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G087850 0.5kb upstream 0.5kb upstream 9978 true Chr05: 6581714-6591691 Populus trichocarpa
Potri.005G087850 0.5kb upstream 0.5kb upstream 500 false Chr05: 6581714-6582213 Populus trichocarpa
Potri.005G087850 0.5kb downstream 0.5kb downstream 9978 true Chr05: 6582214-6592191 Populus trichocarpa
Potri.005G087850 0.5kb downstream 0.5kb downstream 500 false Chr05: 6591692-6592191 Populus trichocarpa
Potri.005G087850 1.0kb upstream 1.0kb upstream 10478 true Chr05: 6581214-6591691 Populus trichocarpa
Potri.005G087850 1.0kb upstream 1.0kb upstream 1000 false Chr05: 6581214-6582213 Populus trichocarpa
Potri.005G087850 1.0kb downstream 1.0kb downstream 10478 true Chr05: 6582214-6592691 Populus trichocarpa
Potri.005G087850 1.0kb downstream 1.0kb downstream 1000 false Chr05: 6591692-6592691 Populus trichocarpa
Potri.005G087850 2.0kb upstream 2.0kb upstream 11478 true Chr05: 6580214-6591691 Populus trichocarpa
Potri.005G087850 2.0kb upstream 2.0kb upstream 2000 false Chr05: 6580214-6582213 Populus trichocarpa
Potri.005G087850 2.0kb downstream 2.0kb downstream 11478 true Chr05: 6582214-6593691 Populus trichocarpa
Potri.005G087850 2.0kb downstream 2.0kb downstream 2000 false Chr05: 6591692-6593691 Populus trichocarpa
Potri.005G087850 5.0kb upstream 5.0kb upstream 14478 true Chr05: 6577214-6591691 Populus trichocarpa
Potri.005G087850 5.0kb upstream 5.0kb upstream 5000 false Chr05: 6577214-6582213 Populus trichocarpa
Potri.005G087850 5.0kb downstream 5.0kb downstream 14478 true Chr05: 6582214-6596691 Populus trichocarpa
Potri.005G087850 5.0kb downstream 5.0kb downstream 5000 false Chr05: 6591692-6596691 Populus trichocarpa
Potri.005G087850 10.0kb upstream 10.0kb upstream 19478 true Chr05: 6572214-6591691 Populus trichocarpa
Potri.005G087850 10.0kb upstream 10.0kb upstream 10000 false Chr05: 6572214-6582213 Populus trichocarpa
Potri.005G087850 10.0kb downstream 10.0kb downstream 19478 true Chr05: 6582214-6601691 Populus trichocarpa
Potri.005G087850 10.0kb downstream 10.0kb downstream 10000 false Chr05: 6591692-6601691 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122457267 5262 Malpighiales View MSA
124237752 5268 Malvidae View MSA
124066992 5270 Rosid View MSA
123752070 5271 Pentapetalae View MSA
122788218 5272 Eudicot View MSA
122045228 5273 Angiosperm View MSA
121348805 5274 Embryophyte View MSA
123424302 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain