Gene : Potri.005G089600 P. trichocarpa v3.1
Defline:  (1 of 1) PTHR11404:SF17 - SUPEROXIDE DISMUTASE [FE] 3, CHLOROPLASTIC Genomic Order:  945
Name:  ? Potri.005G089600 Secondary Identifier:  ? PAC:37263603
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa DETOX1-PWY Populus trichocarpa pathologic  
Ptrichocarpa DETOX1-PWY-1 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6854 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G089600 0.5kb upstream 0.5kb upstream 3733 true Chr05: 6680793-6684525 Populus trichocarpa
Potri.005G089600 0.5kb upstream 0.5kb upstream 500 false Chr05: 6684026-6684525 Populus trichocarpa
Potri.005G089600 0.5kb downstream 0.5kb downstream 3733 true Chr05: 6680293-6684025 Populus trichocarpa
Potri.005G089600 0.5kb downstream 0.5kb downstream 500 false Chr05: 6680293-6680792 Populus trichocarpa
Potri.005G089600 1.0kb upstream 1.0kb upstream 4233 true Chr05: 6680793-6685025 Populus trichocarpa
Potri.005G089600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 6684026-6685025 Populus trichocarpa
Potri.005G089600 1.0kb downstream 1.0kb downstream 4233 true Chr05: 6679793-6684025 Populus trichocarpa
Potri.005G089600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 6679793-6680792 Populus trichocarpa
Potri.005G089600 2.0kb upstream 2.0kb upstream 5233 true Chr05: 6680793-6686025 Populus trichocarpa
Potri.005G089600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 6684026-6686025 Populus trichocarpa
Potri.005G089600 2.0kb downstream 2.0kb downstream 5233 true Chr05: 6678793-6684025 Populus trichocarpa
Potri.005G089600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 6678793-6680792 Populus trichocarpa
Potri.005G089600 5.0kb upstream 5.0kb upstream 8233 true Chr05: 6680793-6689025 Populus trichocarpa
Potri.005G089600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 6684026-6689025 Populus trichocarpa
Potri.005G089600 5.0kb downstream 5.0kb downstream 8233 true Chr05: 6675793-6684025 Populus trichocarpa
Potri.005G089600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 6675793-6680792 Populus trichocarpa
Potri.005G089600 10.0kb upstream 10.0kb upstream 13233 true Chr05: 6680793-6694025 Populus trichocarpa
Potri.005G089600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 6684026-6694025 Populus trichocarpa
Potri.005G089600 10.0kb downstream 10.0kb downstream 13233 true Chr05: 6670793-6684025 Populus trichocarpa
Potri.005G089600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 6670793-6680792 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122453852 5262 Malpighiales View MSA
124242563 5268 Malvidae View MSA
124067465 5270 Rosid View MSA
123740223 5271 Pentapetalae View MSA
122788752 5272 Eudicot View MSA
122044976 5273 Angiosperm View MSA
121351401 5274 Embryophyte View MSA
123425969 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain