Gene : Potri.005G083100 P. trichocarpa v3.1
Defline:  (1 of 1) 2.3.3.13 - 2-isopropylmalate synthase / Isopropylmalate synthetase Genomic Order:  880
Name:  ? Potri.005G083100 Secondary Identifier:  ? PAC:37265993
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa BRANCHED-CHAIN-AA-SYN-PWY Populus trichocarpa pathologic  
Ptrichocarpa LEUSYN-PWY Populus trichocarpa pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G083100 0.5kb upstream 0.5kb upstream 6569 true Chr05: 6137497-6144065 Populus trichocarpa
Potri.005G083100 0.5kb upstream 0.5kb upstream 500 false Chr05: 6143566-6144065 Populus trichocarpa
Potri.005G083100 0.5kb downstream 0.5kb downstream 6569 true Chr05: 6136997-6143565 Populus trichocarpa
Potri.005G083100 0.5kb downstream 0.5kb downstream 500 false Chr05: 6136997-6137496 Populus trichocarpa
Potri.005G083100 1.0kb upstream 1.0kb upstream 7069 true Chr05: 6137497-6144565 Populus trichocarpa
Potri.005G083100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 6143566-6144565 Populus trichocarpa
Potri.005G083100 1.0kb downstream 1.0kb downstream 7069 true Chr05: 6136497-6143565 Populus trichocarpa
Potri.005G083100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 6136497-6137496 Populus trichocarpa
Potri.005G083100 2.0kb upstream 2.0kb upstream 8069 true Chr05: 6137497-6145565 Populus trichocarpa
Potri.005G083100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 6143566-6145565 Populus trichocarpa
Potri.005G083100 2.0kb downstream 2.0kb downstream 8069 true Chr05: 6135497-6143565 Populus trichocarpa
Potri.005G083100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 6135497-6137496 Populus trichocarpa
Potri.005G083100 5.0kb upstream 5.0kb upstream 11069 true Chr05: 6137497-6148565 Populus trichocarpa
Potri.005G083100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 6143566-6148565 Populus trichocarpa
Potri.005G083100 5.0kb downstream 5.0kb downstream 11069 true Chr05: 6132497-6143565 Populus trichocarpa
Potri.005G083100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 6132497-6137496 Populus trichocarpa
Potri.005G083100 10.0kb upstream 10.0kb upstream 16069 true Chr05: 6137497-6153565 Populus trichocarpa
Potri.005G083100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 6143566-6153565 Populus trichocarpa
Potri.005G083100 10.0kb downstream 10.0kb downstream 16069 true Chr05: 6127497-6143565 Populus trichocarpa
Potri.005G083100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 6127497-6137496 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122463019 5262 Malpighiales View MSA
124251393 5268 Malvidae View MSA
124073887 5270 Rosid View MSA
123749835 5271 Pentapetalae View MSA
122795041 5272 Eudicot View MSA
122042075 5273 Angiosperm View MSA
121343846 5274 Embryophyte View MSA
123424493 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain