Gene : Potri.005G077600 P. trichocarpa v3.1

Defline:  (1 of 2) PTHR10909:SF317 - ACYL-COENZYME A OXIDASE 2, PEROXISOMAL Genomic Order:  824
Name:  ? Potri.005G077600 Secondary Identifier:  ? PAC:37266242

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-5136 Populus trichocarpa pathologic  
Ptrichocarpa PWY-561 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6837 Populus trichocarpa pathologic  
Ptrichocarpa PWY-735 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7606 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7726 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G077600 0.5kb upstream 0.5kb upstream 4974 true Chr05: 5728625-5733598 Populus trichocarpa
Potri.005G077600 0.5kb upstream 0.5kb upstream 500 false Chr05: 5728625-5729124 Populus trichocarpa
Potri.005G077600 0.5kb downstream 0.5kb downstream 4974 true Chr05: 5729125-5734098 Populus trichocarpa
Potri.005G077600 0.5kb downstream 0.5kb downstream 500 false Chr05: 5733599-5734098 Populus trichocarpa
Potri.005G077600 1.0kb upstream 1.0kb upstream 5474 true Chr05: 5728125-5733598 Populus trichocarpa
Potri.005G077600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 5728125-5729124 Populus trichocarpa
Potri.005G077600 1.0kb downstream 1.0kb downstream 5474 true Chr05: 5729125-5734598 Populus trichocarpa
Potri.005G077600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 5733599-5734598 Populus trichocarpa
Potri.005G077600 2.0kb upstream 2.0kb upstream 6474 true Chr05: 5727125-5733598 Populus trichocarpa
Potri.005G077600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 5727125-5729124 Populus trichocarpa
Potri.005G077600 2.0kb downstream 2.0kb downstream 6474 true Chr05: 5729125-5735598 Populus trichocarpa
Potri.005G077600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 5733599-5735598 Populus trichocarpa
Potri.005G077600 5.0kb upstream 5.0kb upstream 9474 true Chr05: 5724125-5733598 Populus trichocarpa
Potri.005G077600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 5724125-5729124 Populus trichocarpa
Potri.005G077600 5.0kb downstream 5.0kb downstream 9474 true Chr05: 5729125-5738598 Populus trichocarpa
Potri.005G077600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 5733599-5738598 Populus trichocarpa
Potri.005G077600 10.0kb upstream 10.0kb upstream 14474 true Chr05: 5719125-5733598 Populus trichocarpa
Potri.005G077600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 5719125-5729124 Populus trichocarpa
Potri.005G077600 10.0kb downstream 10.0kb downstream 14474 true Chr05: 5729125-5743598 Populus trichocarpa
Potri.005G077600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 5733599-5743598 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122411175 5262 Malpighiales View MSA
124205961 5268 Malvidae View MSA
124061982 5270 Rosid View MSA
123753780 5271 Pentapetalae View MSA
122787775 5272 Eudicot View MSA
122044984 5273 Angiosperm View MSA
121345610 5274 Embryophyte View MSA
123428252 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain