Gene : Potri.005G053900 P. trichocarpa v3.1
Defline:  (1 of 2) PTHR31734:SF28 - AUXIN-RESPONSIVE PROTEIN IAA16 Genomic Order:  574
Name:  ? Potri.005G053900 Secondary Identifier:  ? PAC:37262624
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G053900 0.5kb upstream 0.5kb upstream 3735 true Chr05: 3853336-3857070 Populus trichocarpa
Potri.005G053900 0.5kb upstream 0.5kb upstream 500 false Chr05: 3853336-3853835 Populus trichocarpa
Potri.005G053900 0.5kb downstream 0.5kb downstream 3735 true Chr05: 3853836-3857570 Populus trichocarpa
Potri.005G053900 0.5kb downstream 0.5kb downstream 500 false Chr05: 3857071-3857570 Populus trichocarpa
Potri.005G053900 1.0kb upstream 1.0kb upstream 4235 true Chr05: 3852836-3857070 Populus trichocarpa
Potri.005G053900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3852836-3853835 Populus trichocarpa
Potri.005G053900 1.0kb downstream 1.0kb downstream 4235 true Chr05: 3853836-3858070 Populus trichocarpa
Potri.005G053900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3857071-3858070 Populus trichocarpa
Potri.005G053900 2.0kb upstream 2.0kb upstream 5235 true Chr05: 3851836-3857070 Populus trichocarpa
Potri.005G053900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3851836-3853835 Populus trichocarpa
Potri.005G053900 2.0kb downstream 2.0kb downstream 5235 true Chr05: 3853836-3859070 Populus trichocarpa
Potri.005G053900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3857071-3859070 Populus trichocarpa
Potri.005G053900 5.0kb upstream 5.0kb upstream 8235 true Chr05: 3848836-3857070 Populus trichocarpa
Potri.005G053900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3848836-3853835 Populus trichocarpa
Potri.005G053900 5.0kb downstream 5.0kb downstream 8235 true Chr05: 3853836-3862070 Populus trichocarpa
Potri.005G053900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3857071-3862070 Populus trichocarpa
Potri.005G053900 10.0kb upstream 10.0kb upstream 13235 true Chr05: 3843836-3857070 Populus trichocarpa
Potri.005G053900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3843836-3853835 Populus trichocarpa
Potri.005G053900 10.0kb downstream 10.0kb downstream 13235 true Chr05: 3853836-3867070 Populus trichocarpa
Potri.005G053900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3857071-3867070 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122458907 5262 Malpighiales View MSA
124239552 5268 Malvidae View MSA
124071523 5270 Rosid View MSA
123744630 5271 Pentapetalae View MSA
122796049 5272 Eudicot View MSA
122042007 5273 Angiosperm View MSA
121309912 5274 Embryophyte View MSA
123347544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain