Gene : Potri.005G052900 P. trichocarpa v3.1
Defline:  calcium-binding EF hand family protein; [ co-ortholog (1of2) of At5g28830, ] Genomic Order:  562
Name:  ? Potri.005G052900 Secondary Identifier:  ? PAC:37262640
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0 Pathways

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G052900 0.5kb upstream 0.5kb upstream 4016 true Chr05: 3773272-3777287 Populus trichocarpa
Potri.005G052900 0.5kb upstream 0.5kb upstream 500 false Chr05: 3773272-3773771 Populus trichocarpa
Potri.005G052900 0.5kb downstream 0.5kb downstream 4016 true Chr05: 3773772-3777787 Populus trichocarpa
Potri.005G052900 0.5kb downstream 0.5kb downstream 500 false Chr05: 3777288-3777787 Populus trichocarpa
Potri.005G052900 1.0kb upstream 1.0kb upstream 4516 true Chr05: 3772772-3777287 Populus trichocarpa
Potri.005G052900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 3772772-3773771 Populus trichocarpa
Potri.005G052900 1.0kb downstream 1.0kb downstream 4516 true Chr05: 3773772-3778287 Populus trichocarpa
Potri.005G052900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 3777288-3778287 Populus trichocarpa
Potri.005G052900 2.0kb upstream 2.0kb upstream 5516 true Chr05: 3771772-3777287 Populus trichocarpa
Potri.005G052900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 3771772-3773771 Populus trichocarpa
Potri.005G052900 2.0kb downstream 2.0kb downstream 5516 true Chr05: 3773772-3779287 Populus trichocarpa
Potri.005G052900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 3777288-3779287 Populus trichocarpa
Potri.005G052900 5.0kb upstream 5.0kb upstream 8516 true Chr05: 3768772-3777287 Populus trichocarpa
Potri.005G052900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 3768772-3773771 Populus trichocarpa
Potri.005G052900 5.0kb downstream 5.0kb downstream 8516 true Chr05: 3773772-3782287 Populus trichocarpa
Potri.005G052900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 3777288-3782287 Populus trichocarpa
Potri.005G052900 10.0kb upstream 10.0kb upstream 13516 true Chr05: 3763772-3777287 Populus trichocarpa
Potri.005G052900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 3763772-3773771 Populus trichocarpa
Potri.005G052900 10.0kb downstream 10.0kb downstream 13516 true Chr05: 3773772-3787287 Populus trichocarpa
Potri.005G052900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 3777288-3787287 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122425738 5262 Malpighiales View MSA
124238562 5268 Malvidae View MSA
124064185 5270 Rosid View MSA
123739646 5271 Pentapetalae View MSA
122789381 5272 Eudicot View MSA
122043203 5273 Angiosperm View MSA
121346779 5274 Embryophyte View MSA
123380443 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain