Gene : Potri.005G156600 P. trichocarpa v3.1

Defline:  (1 of 1) PTHR11002:SF19 - CARBONIC ANHYDRASE Genomic Order:  1639
Name:  ? Potri.005G156600 Secondary Identifier:  ? PAC:37263033

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa CYANCAT-PWY Populus trichocarpa pathologic  
Ptrichocarpa PWY-241 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7115 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7117 Populus trichocarpa pathologic  
Ptrichocarpa PWYQT-4429 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G156600 0.5kb upstream 0.5kb upstream 3952 true Chr05: 15608582-15612533 Populus trichocarpa
Potri.005G156600 0.5kb upstream 0.5kb upstream 500 false Chr05: 15608582-15609081 Populus trichocarpa
Potri.005G156600 0.5kb downstream 0.5kb downstream 3952 true Chr05: 15609082-15613033 Populus trichocarpa
Potri.005G156600 0.5kb downstream 0.5kb downstream 500 false Chr05: 15612534-15613033 Populus trichocarpa
Potri.005G156600 1.0kb upstream 1.0kb upstream 4452 true Chr05: 15608082-15612533 Populus trichocarpa
Potri.005G156600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 15608082-15609081 Populus trichocarpa
Potri.005G156600 1.0kb downstream 1.0kb downstream 4452 true Chr05: 15609082-15613533 Populus trichocarpa
Potri.005G156600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 15612534-15613533 Populus trichocarpa
Potri.005G156600 2.0kb upstream 2.0kb upstream 5452 true Chr05: 15607082-15612533 Populus trichocarpa
Potri.005G156600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 15607082-15609081 Populus trichocarpa
Potri.005G156600 2.0kb downstream 2.0kb downstream 5452 true Chr05: 15609082-15614533 Populus trichocarpa
Potri.005G156600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 15612534-15614533 Populus trichocarpa
Potri.005G156600 5.0kb upstream 5.0kb upstream 8452 true Chr05: 15604082-15612533 Populus trichocarpa
Potri.005G156600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 15604082-15609081 Populus trichocarpa
Potri.005G156600 5.0kb downstream 5.0kb downstream 8452 true Chr05: 15609082-15617533 Populus trichocarpa
Potri.005G156600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 15612534-15617533 Populus trichocarpa
Potri.005G156600 10.0kb upstream 10.0kb upstream 13452 true Chr05: 15599082-15612533 Populus trichocarpa
Potri.005G156600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 15599082-15609081 Populus trichocarpa
Potri.005G156600 10.0kb downstream 10.0kb downstream 13452 true Chr05: 15609082-15622533 Populus trichocarpa
Potri.005G156600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 15612534-15622533 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450688 5262 Malpighiales View MSA
124250264 5268 Malvidae View MSA
124069965 5270 Rosid View MSA
123749741 5271 Pentapetalae View MSA
122787175 5272 Eudicot View MSA
122042503 5273 Angiosperm View MSA
121348783 5274 Embryophyte View MSA
123427888 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain