Gene : Potri.005G152200 P. trichocarpa v3.1
Defline:  (1 of 1) K14765 - U3 small nucleolar ribonucleoprotein protein LCP5 (NGDN, LCP5) Genomic Order:  1593
Name:  ? Potri.005G152200 Secondary Identifier:  ? PAC:37265421
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G152200 0.5kb upstream 0.5kb upstream 3211 true Chr05: 14306080-14309290 Populus trichocarpa
Potri.005G152200 0.5kb upstream 0.5kb upstream 500 false Chr05: 14308791-14309290 Populus trichocarpa
Potri.005G152200 0.5kb downstream 0.5kb downstream 3211 true Chr05: 14305580-14308790 Populus trichocarpa
Potri.005G152200 0.5kb downstream 0.5kb downstream 500 false Chr05: 14305580-14306079 Populus trichocarpa
Potri.005G152200 1.0kb upstream 1.0kb upstream 3711 true Chr05: 14306080-14309790 Populus trichocarpa
Potri.005G152200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 14308791-14309790 Populus trichocarpa
Potri.005G152200 1.0kb downstream 1.0kb downstream 3711 true Chr05: 14305080-14308790 Populus trichocarpa
Potri.005G152200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 14305080-14306079 Populus trichocarpa
Potri.005G152200 2.0kb upstream 2.0kb upstream 4711 true Chr05: 14306080-14310790 Populus trichocarpa
Potri.005G152200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 14308791-14310790 Populus trichocarpa
Potri.005G152200 2.0kb downstream 2.0kb downstream 4711 true Chr05: 14304080-14308790 Populus trichocarpa
Potri.005G152200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 14304080-14306079 Populus trichocarpa
Potri.005G152200 5.0kb upstream 5.0kb upstream 7711 true Chr05: 14306080-14313790 Populus trichocarpa
Potri.005G152200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 14308791-14313790 Populus trichocarpa
Potri.005G152200 5.0kb downstream 5.0kb downstream 7711 true Chr05: 14301080-14308790 Populus trichocarpa
Potri.005G152200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 14301080-14306079 Populus trichocarpa
Potri.005G152200 10.0kb upstream 10.0kb upstream 12711 true Chr05: 14306080-14318790 Populus trichocarpa
Potri.005G152200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 14308791-14318790 Populus trichocarpa
Potri.005G152200 10.0kb downstream 10.0kb downstream 12711 true Chr05: 14296080-14308790 Populus trichocarpa
Potri.005G152200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 14296080-14306079 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122450800 5262 Malpighiales View MSA
124242828 5268 Malvidae View MSA
124066836 5270 Rosid View MSA
123740201 5271 Pentapetalae View MSA
122793793 5272 Eudicot View MSA
122047581 5273 Angiosperm View MSA
121345702 5274 Embryophyte View MSA
123380258 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain