Gene : Potri.005G123900 P. trichocarpa v3.1
Defline:  (1 of 2) K00234 - succinate dehydrogenase (ubiquinone) flavoprotein subunit (SDHA, SDH1) Genomic Order:  1307
Name:  ? Potri.005G123900 Secondary Identifier:  ? PAC:37262611
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6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa PWY-3781 Populus trichocarpa pathologic  
Ptrichocarpa PWY-4302 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5464 Populus trichocarpa pathologic  
Ptrichocarpa PWY-561 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5690 Populus trichocarpa pathologic  
Ptrichocarpa PWY-7279 Populus trichocarpa pathologic  

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G123900 0.5kb upstream 0.5kb upstream 7432 true Chr05: 9657125-9664556 Populus trichocarpa
Potri.005G123900 0.5kb upstream 0.5kb upstream 500 false Chr05: 9664057-9664556 Populus trichocarpa
Potri.005G123900 0.5kb downstream 0.5kb downstream 7432 true Chr05: 9656625-9664056 Populus trichocarpa
Potri.005G123900 0.5kb downstream 0.5kb downstream 500 false Chr05: 9656625-9657124 Populus trichocarpa
Potri.005G123900 1.0kb upstream 1.0kb upstream 7932 true Chr05: 9657125-9665056 Populus trichocarpa
Potri.005G123900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 9664057-9665056 Populus trichocarpa
Potri.005G123900 1.0kb downstream 1.0kb downstream 7932 true Chr05: 9656125-9664056 Populus trichocarpa
Potri.005G123900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 9656125-9657124 Populus trichocarpa
Potri.005G123900 2.0kb upstream 2.0kb upstream 8932 true Chr05: 9657125-9666056 Populus trichocarpa
Potri.005G123900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 9664057-9666056 Populus trichocarpa
Potri.005G123900 2.0kb downstream 2.0kb downstream 8932 true Chr05: 9655125-9664056 Populus trichocarpa
Potri.005G123900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 9655125-9657124 Populus trichocarpa
Potri.005G123900 5.0kb upstream 5.0kb upstream 11932 true Chr05: 9657125-9669056 Populus trichocarpa
Potri.005G123900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 9664057-9669056 Populus trichocarpa
Potri.005G123900 5.0kb downstream 5.0kb downstream 11932 true Chr05: 9652125-9664056 Populus trichocarpa
Potri.005G123900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 9652125-9657124 Populus trichocarpa
Potri.005G123900 10.0kb upstream 10.0kb upstream 16932 true Chr05: 9657125-9674056 Populus trichocarpa
Potri.005G123900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 9664057-9674056 Populus trichocarpa
Potri.005G123900 10.0kb downstream 10.0kb downstream 16932 true Chr05: 9647125-9664056 Populus trichocarpa
Potri.005G123900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 9647125-9657124 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122452650 5262 Malpighiales View MSA
124254053 5268 Malvidae View MSA
124063356 5270 Rosid View MSA
123753034 5271 Pentapetalae View MSA
122790960 5272 Eudicot View MSA
122043363 5273 Angiosperm View MSA
121346345 5274 Embryophyte View MSA
123424943 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain