Gene : Potri.005G108100 P. trichocarpa v3.1
Defline:  (1 of 4) K01681 - aconitate hydratase (ACO, acnA) Genomic Order:  1140
Name:  ? Potri.005G108100 Secondary Identifier:  ? PAC:37266054
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Ptrichocarpa GLYOXYLATE-BYPASS Populus trichocarpa pathologic  
Ptrichocarpa PWY-5464 Populus trichocarpa pathologic  
Ptrichocarpa PWY-561 Populus trichocarpa pathologic  
Ptrichocarpa PWY-5690 Populus trichocarpa pathologic  
Ptrichocarpa PWY-6549 Populus trichocarpa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Potri.005G108100 0.5kb upstream 0.5kb upstream 7444 true Chr05: 8250723-8258166 Populus trichocarpa
Potri.005G108100 0.5kb upstream 0.5kb upstream 500 false Chr05: 8257667-8258166 Populus trichocarpa
Potri.005G108100 0.5kb downstream 0.5kb downstream 7444 true Chr05: 8250223-8257666 Populus trichocarpa
Potri.005G108100 0.5kb downstream 0.5kb downstream 500 false Chr05: 8250223-8250722 Populus trichocarpa
Potri.005G108100 1.0kb upstream 1.0kb upstream 7944 true Chr05: 8250723-8258666 Populus trichocarpa
Potri.005G108100 1.0kb upstream 1.0kb upstream 1000 false Chr05: 8257667-8258666 Populus trichocarpa
Potri.005G108100 1.0kb downstream 1.0kb downstream 7944 true Chr05: 8249723-8257666 Populus trichocarpa
Potri.005G108100 1.0kb downstream 1.0kb downstream 1000 false Chr05: 8249723-8250722 Populus trichocarpa
Potri.005G108100 2.0kb upstream 2.0kb upstream 8944 true Chr05: 8250723-8259666 Populus trichocarpa
Potri.005G108100 2.0kb upstream 2.0kb upstream 2000 false Chr05: 8257667-8259666 Populus trichocarpa
Potri.005G108100 2.0kb downstream 2.0kb downstream 8944 true Chr05: 8248723-8257666 Populus trichocarpa
Potri.005G108100 2.0kb downstream 2.0kb downstream 2000 false Chr05: 8248723-8250722 Populus trichocarpa
Potri.005G108100 5.0kb upstream 5.0kb upstream 11944 true Chr05: 8250723-8262666 Populus trichocarpa
Potri.005G108100 5.0kb upstream 5.0kb upstream 5000 false Chr05: 8257667-8262666 Populus trichocarpa
Potri.005G108100 5.0kb downstream 5.0kb downstream 11944 true Chr05: 8245723-8257666 Populus trichocarpa
Potri.005G108100 5.0kb downstream 5.0kb downstream 5000 false Chr05: 8245723-8250722 Populus trichocarpa
Potri.005G108100 10.0kb upstream 10.0kb upstream 16944 true Chr05: 8250723-8267666 Populus trichocarpa
Potri.005G108100 10.0kb upstream 10.0kb upstream 10000 false Chr05: 8257667-8267666 Populus trichocarpa
Potri.005G108100 10.0kb downstream 10.0kb downstream 16944 true Chr05: 8240723-8257666 Populus trichocarpa
Potri.005G108100 10.0kb downstream 10.0kb downstream 10000 false Chr05: 8240723-8250722 Populus trichocarpa

8 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122448021 5262 Malpighiales View MSA
124245948 5268 Malvidae View MSA
124069604 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain